| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1994 |
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| Symbol | |
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| ID | 4459695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2440494 |
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| End bp | 2442767 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639702760 |
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| Product | spermidine synthase |
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| Protein accession | YP_846112 |
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| Protein GI | 116749425 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCTG CGCCGTTCCC AGCCGTTCTT CTGGCCGGCT TCGCCTCCAC GGCGGGGCAG
ATACTGGTCC TGAGGGAATT GCTCGTCCTT TTTTACGGCA ATGAGCTTTC CACGGGTTTG
ATATTCGCCG GATGGCTGTT GTGGACTGCT TTGGGAAGCA CGCTCGCCGG TCGTTTTCAC
AAGAAAATGA ACCCGGACGG GGTGGGACTC GCGGCGGCGC TGCCCTTCCT GGCTCTGCTG
CTCCCCTTGA CCGTTTTCTT CATCAGGGCT TCGAGGCTCA TCTGGGCCAT TCCCGTCGGC
GAGATCGTGC GACCGGGCCT GATGCTCGGC ATTACCCTGT CGGTGACCGC TCCGTTCTGC
CTGGCCTCCG GAATGGTATT CGCTCTCGCC TGGACCCAGG CCGGAGCCGG CAACGCACAC
ACAAACGGTC GCCCGATCGC CATTTACCTC GGTGAGGCCG CGGGAGCCGC CGTCGGAGGG
CTTTTCTACA CCTTTGTCCT GCTGCCCGCG GTATCGGCCG TTGCCGCGGC GCTGATCGTC
GCCGCCATCG TTATTGCCGG TTGCATCGCC TTGCCAAAGC CGCGCCGATC CGACCGACGC
GCAACGCAAG CCGTTACGGG AACGTGCCTG GCCGCGCTCG TTCTCCTCGG GATCGGGCTG
ACCTTCTCCC CCGCCCTCGA TGATGCGAGC CGCAGGCTAC AGTGGGGATC GAATTTCCTT
TTCGCCCGCG ACACACCGTT TCACAATCTG GCTCTGCTGC GCGAAGCGGA CCAGTACAGC
CTGTTCGGCA ACGGCCTGCT GCTCTTTTCC TTTCCGGACC CGCAAACGGC GGAATACTGC
GTCCATCTCC CCCTGCTCCA GCATCCCGAC CCCGCCGCCG TTCTGCTCAT CGGCGGGGAT
GCCCCCAGGC TGGCCGCCGA GGCGGTCAAG CACCCGGAGC TCGAGCGCCT GGACTGCGTC
GAGCCCGACC CCGAAATCAT CCGGATCGCG GAAGAACTGT CGGCCGGAGC GCCCCGCGCC
GCTCTCAAAG ATCCCCGGGT GCATCTTTTT CATGAGGATG CGGCATCTTT CGTGAGAACG
CGAAAACACC GCTACGACGT GATTGTCTTG AATCTCGGCA ACCCCCTGAC CGCGGAAATG
AACCGATTTT ACACCGAGGA GTTCTTTTCC GACATCCGCG GGCGTTTGAA TCCAAAAGGG
GTCTTCTCGT TCGCGGTTTC ATCGTCACCG GACATGATCG GCCCCGTTCA GGCCCGTTTC
CTGCGGTCGC TTGAAGTCAC TCTGCGCGAA GTCTTTCCCA CAGTCCTGGT CATCCCGGGG
GAAAGCGCCC GGTTCCTCGG CACGGACCCC GACGGCCGGC TGCTCAGCGA CCCGCGGGAA
CTCATCGACC GCATCTCCGC GCGGCGTCTC GACTTGAAAT TCGTCAGGGA ATACTACCTC
TTCGACTATC TCAATCCGCT TCGAATCGCA TACCTTGCAA ACGTGCTGCA GGAAACCGAA
GGGGTCAAGG TCAACCGCGA TTTTGAACCG AGGTGCTATT TCCACAACCT GGCAGTGTGG
GGAGCCCAGC TTGACCCCTC CATCGGTTCC GCTCTGAACA GGCTCTCGGG CGCGGGTCAA
GGGGTCCTGT GGGGTGCCCT CGGCGCGGTC TCGCTCGCGA TCCTTGCGAC CTTCGCAAGG
GGAAGAGCGG GGTATTCCCG AGCCGTGGCC ATGAACGTGA TGGTCGTCGG CGCCGCTCAA
ATGACCCTCG AAATCGTGCT GCTGGTGGGC TTCCAGGTCC TTGCGGGTTT CGTGTACACC
CAATTGGCTT TGATCGTGTC CTTCTACATG GCGGGGCTGG CTTCCGGCGG CGCCGTGACG
GCTTTCGGCG CGAAACGGAT AGAGAACGGC GCGCCGGGGA TGGCTGCGGT CCAGGCGGCA
TTCTCGGCAT TGCTGGTCGC GACGATGCCG ATCATGTCCG CATTGCGCAC TTACCTGGAA
GAGTCTTCCG ACGCCATGGC GCTCGTGAAG TTCGTCTTCT CGGCCCTGGC CTTCGCGGCC
GGCCTCCTGG GCGGCCTCCA CTTCGGGCTG GCGGTGACGG TGCGCACGGG AACGAGTCCC
GCCGTGAACC TCAAGGGCCC CGCCCTCTAC GCCGCGGACC TCGCAGGCTC GGCAGGCGGT
GTCGTCCTCT CGTCGCTGTT CCTGGTGCCC GTCTACGGAC TCGCGGCAAC GCTCAAAGCC
CTCGCCGTAC TCTGCCTCGC GTGTTCCCTC ACCCTCATCC GGCCCCGAAA ATGA
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| Protein sequence | MRSAPFPAVL LAGFASTAGQ ILVLRELLVL FYGNELSTGL IFAGWLLWTA LGSTLAGRFH
KKMNPDGVGL AAALPFLALL LPLTVFFIRA SRLIWAIPVG EIVRPGLMLG ITLSVTAPFC
LASGMVFALA WTQAGAGNAH TNGRPIAIYL GEAAGAAVGG LFYTFVLLPA VSAVAAALIV
AAIVIAGCIA LPKPRRSDRR ATQAVTGTCL AALVLLGIGL TFSPALDDAS RRLQWGSNFL
FARDTPFHNL ALLREADQYS LFGNGLLLFS FPDPQTAEYC VHLPLLQHPD PAAVLLIGGD
APRLAAEAVK HPELERLDCV EPDPEIIRIA EELSAGAPRA ALKDPRVHLF HEDAASFVRT
RKHRYDVIVL NLGNPLTAEM NRFYTEEFFS DIRGRLNPKG VFSFAVSSSP DMIGPVQARF
LRSLEVTLRE VFPTVLVIPG ESARFLGTDP DGRLLSDPRE LIDRISARRL DLKFVREYYL
FDYLNPLRIA YLANVLQETE GVKVNRDFEP RCYFHNLAVW GAQLDPSIGS ALNRLSGAGQ
GVLWGALGAV SLAILATFAR GRAGYSRAVA MNVMVVGAAQ MTLEIVLLVG FQVLAGFVYT
QLALIVSFYM AGLASGGAVT AFGAKRIENG APGMAAVQAA FSALLVATMP IMSALRTYLE
ESSDAMALVK FVFSALAFAA GLLGGLHFGL AVTVRTGTSP AVNLKGPALY AADLAGSAGG
VVLSSLFLVP VYGLAATLKA LAVLCLACSL TLIRPRK
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