Gene Sfum_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1958 
Symbol 
ID4459729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2395128 
End bp2395757 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content61% 
IMG OID639702726 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_846078 
Protein GI116749391 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAATT CCATGAGCGC CAACAACTGC AACACCTACC TGATCGACGC CGGGGCCAGG 
GTGCTCATCG ATCCGGGGCA CCTGACGCTG TTCGAGCACG TGAACGCCGG CCTGAAGGAG
CTCGACCTGG GACCCGGCGA CATCGATCTG ATCCTGTCGA CTCACGTGCA TCCGGATCAC
GTCGAGGCGG TCAAGTGGTT CAACGGGACT CCGGCTCTGT TTGCCGTCAA CGAAGAGGAC
TGGCGGCTGT TCAGGGAAAT GGCGATCTCT CTGGGCGCCG GCATGGATGT CGAAGCGTAC
GTGCCCGATT TCTTCCTTGC CGAAGGGGAA CTGGACGTCA AGGGGTTGAA ACTGGAGATC
ATTCACACTC CCGGCCATTC TCCCGGGTCC GTTTCGATCT ATTGGCGGGA ACGTAAGGTG
CTCTTCACGG GCGACGTGAT CTTCAAGGAG GGGCTGGGAA GGACGGATCT TCCCGGCGGA
AACGGCGAAC TGCTGAAGCG GAGCATCAAG CGGCTCTCGG AATTCGATGC GGAGTGGATG
CTCGCGGGGC ACGGGGACGT GGTGGCCGGG GCCGAGCGGG TGCGCAGGAA TTTCGAGAAC
GTGGCCAGGT ACTGGTTCAA CTTCATCTGA
 
Protein sequence
MWNSMSANNC NTYLIDAGAR VLIDPGHLTL FEHVNAGLKE LDLGPGDIDL ILSTHVHPDH 
VEAVKWFNGT PALFAVNEED WRLFREMAIS LGAGMDVEAY VPDFFLAEGE LDVKGLKLEI
IHTPGHSPGS VSIYWRERKV LFTGDVIFKE GLGRTDLPGG NGELLKRSIK RLSEFDAEWM
LAGHGDVVAG AERVRRNFEN VARYWFNFI