| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1930 |
|---|
| Symbol | |
|---|
| ID | 4459767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2353577 |
|---|
| End bp | 2355082 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639702697 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_846050 |
|---|
| Protein GI | 116749363 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00162795 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.011056 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG ACCAGTTTCC GGAACATATC CGGCCGTACC TGGTGCCCCG GGCGGGCGGC
GAGTATGCGT ACGAGTGCTT CTCGTGCGGT CGGGAGCACG GTATCGAACG GCTGCTCTAC
ACCTGTCCGG ACTGTGGCAG CGTATTGATG ATCAAGGACC TGGAATGGAG TCGCCTGAAG
CGGATTCCGG GATCCTTGTG GCGCGAGATA TTCGACTACC GGAGTATGCT GACGCTTCCT
GCCCTGCGGG GTATCTATCG GTACCACGAG TTGATCGGTT CGGTGATTCC GCCCGAATCG
GTGGTCTGGC TCGGAGAGGG ATACACGCCG GTGGTGGCGG CCAACGCGGT GCTGTGCGAC
TGGGCGGGCT GTGCCTTCTT TTTCAAGAAC GACGGCCAGA ATCCCAGCGC CTCGTTCAAA
GACCGCGGAA TGGCCAGTGC TTTCAGCTAT CTCAACTACC TCATCGGGCA CCGCGGCATG
GAGGATGTTC TGGCCATCTG CGCATCGACC GGCGACACCT CCGCTTCGGC GGCGCTCTAT
GGCTCATATT TCGTGCACGG AGTGAAATCC GCCGTCTTGC TGCCTCACGG CAAGGTCACC
CCGCAGCAGC TCGGACAGCC GCTCGGAAGC GGTGCCCGGG TCATCGAGAT CCCCGGTGTT
TTCGATGACT GCATGAAGGT CGTCGAATAC CTTTCCGAGC ACTACTCCGT TGCCCTGATG
AATTCCAAGA ACGCCTGGCG TATTCTGGGC CAGGAATCCT ACAGCTATGA AATCGCCCAG
GCATTCGACT ACGAAATCGG GGACCTGGCG GTGTTCGTGC CCATCGGCAA CGCCGGCAAC
ATCACGGCGG TGCTGCAGGG ATTCCTCAAG CTCCACGACC TGGGAATCAT CCCGGCCCTT
CCGGCCGTGT TCGGCGTGCA GTCCGAACAC GCGAATCCGG TCTATCTCTA CTACCTGGAA
CCCGAACGCG AGAAGCGGCG ATTCCGCCCG GTGACGGTGA GGCCGAGCGT GGCCCAGGCG
GCCATGATCG GGAACCCGGT CTCCATGCCG CGCGTGGTGA AGCTGGTCGA AGAATATCGA
CTGCGGGCGG GCGAGGATGC GGTGCGGGTG GTGGAGGTGA GCGAGCAGGA GATCATGGAC
GCCATGCTGA CGGCCAACCG GAACGGGCAC ATCGTTTGCA CCCAGGGCGG CGAATGCCTT
GCCGGCTGCC GCAAAGCCGT CGCTTCGGGA ATGCAGGCCG CCGGGCGGCG CGCCGTCCTC
GACGCCACCG CGCACGCATT GAAGTTTTCC GTTTTTCAGG ACAAATATTT TTCCGATAGC
TTCGAACCGG AATATGAAGT GGTGCCGAAG GCGGAGCTCC GGAACGCTCC CGTGCTGGTG
TCGCCCCCCG ACGGCGTTCC GAAGCCCGTG CCGGGGCGGG AGATGCCCCC GGAGGATTTC
CGGCGGTTCC TGGCCTTTGC GTCCGGCGCC GTCGCCGAGC TTCTCGGGCT GAAACGGAAG
CAGTGA
|
|---|
| Protein sequence | MKIDQFPEHI RPYLVPRAGG EYAYECFSCG REHGIERLLY TCPDCGSVLM IKDLEWSRLK
RIPGSLWREI FDYRSMLTLP ALRGIYRYHE LIGSVIPPES VVWLGEGYTP VVAANAVLCD
WAGCAFFFKN DGQNPSASFK DRGMASAFSY LNYLIGHRGM EDVLAICAST GDTSASAALY
GSYFVHGVKS AVLLPHGKVT PQQLGQPLGS GARVIEIPGV FDDCMKVVEY LSEHYSVALM
NSKNAWRILG QESYSYEIAQ AFDYEIGDLA VFVPIGNAGN ITAVLQGFLK LHDLGIIPAL
PAVFGVQSEH ANPVYLYYLE PEREKRRFRP VTVRPSVAQA AMIGNPVSMP RVVKLVEEYR
LRAGEDAVRV VEVSEQEIMD AMLTANRNGH IVCTQGGECL AGCRKAVASG MQAAGRRAVL
DATAHALKFS VFQDKYFSDS FEPEYEVVPK AELRNAPVLV SPPDGVPKPV PGREMPPEDF
RRFLAFASGA VAELLGLKRK Q
|
|---|
| |