Gene Sfum_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1907 
Symbol 
ID4459778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2327289 
End bp2328215 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content62% 
IMG OID639702674 
ProductLysR family transcriptional regulator 
Protein accessionYP_846027 
Protein GI116749340 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.279335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000102783 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAGTTGC GACAGCTCAA GACATTCAGG GTCGTGGCGA ACCTTTTGAG CTTCAACAAG 
GCGGCCGGGC AGCTTCATTA CGCACAGTCG AGCATTTCGG CCCAGATTCA AATCCTGGAA
GAGGAGCTGG GGGTGCAGCT CTTCGACCGC CTGGGCAAGC GGGTGCAGCT GACGGAGGCC
GGCGTGCGGT TGCTCCAGTA TGCAAACAAG ATACTGGACC TGGTGGACGA GACGAACTCA
ATGGTCAACC GGGTCAACGA GCCCACCGGG TCATTGACGA TCCGGATCCC GGAAACGTTG
GGCGTGCGCC GGCTGCCGGC CGTGCTCAGG GAATTCCACT CCCGGTTCCC CAGGGTGCGG
CTGAACTTCA TCACGTGCGC GCTCGAAGGG CTGGACAAGG ACCTGCGCAA GGGCATAACC
GATCTGGCGT TCCTGCTTGC CGAATCGATA AACGCGGCGG ATCTCGACAT GGCGACCCTC
GGGTTCGAGC CGGTGGTGCT CGTGGCCGCC CCGGATCATC CCCTGGCCGC GAAAAGGAAA
GTGCACACGA GGGATTTGAC CGGTTCGACC ATCCTGCTTT CGAGGGTGGA CTGCAGTTAC
CGGAAGGTCC TGGAACAGAT CCTGGAGCAG GAAGAGGTCA CGCGGTTCAA CCGGTTCGAA
TTCAGCAGCG TGGAAGTGAT CAAGCACTGC GTCATGGCGG GGGTGGGGAT ATCGGTCCTG
CCGTCGATTG CCGTGGCCGA GGATGTGGCC CGCAAGCGGA TGGTCGTTCT CCCCTGGTCC
GAGGGCGGGA TCCAGGTGGC CGTGCTCATG GTCTGGTACC GCGAACGATG GATTTCACCC
ACCCTGCAGG CGTTCATGGA CGTCACGAAA AAGGTGTTCG CGCAGGCGGC CGAAAAACCG
TCCCGGGCGG TCAGTACTCG CACTTGA
 
Protein sequence
MELRQLKTFR VVANLLSFNK AAGQLHYAQS SISAQIQILE EELGVQLFDR LGKRVQLTEA 
GVRLLQYANK ILDLVDETNS MVNRVNEPTG SLTIRIPETL GVRRLPAVLR EFHSRFPRVR
LNFITCALEG LDKDLRKGIT DLAFLLAESI NAADLDMATL GFEPVVLVAA PDHPLAAKRK
VHTRDLTGST ILLSRVDCSY RKVLEQILEQ EEVTRFNRFE FSSVEVIKHC VMAGVGISVL
PSIAVAEDVA RKRMVVLPWS EGGIQVAVLM VWYRERWISP TLQAFMDVTK KVFAQAAEKP
SRAVSTRT