Gene Sfum_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1865 
Symbol 
ID4459841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2281645 
End bp2282814 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content64% 
IMG OID639702632 
Producthypothetical protein 
Protein accessionYP_845985 
Protein GI116749298 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTC TTTTCTTGCT CCCCGGACGT GAGAAGCGAA TCCTCCAGGG ACATCGCTGG 
GTGTTCAACA ACGAGATTGA CGGACGGCTC CCCGACTTTG AACCGGGGAG TTGGGTCGAA
GTGTTCTCAT CGAAAAGAGT CCCGCTCGGC CGCGGTTACA TCAATCCCCG ATCGCTCATT
GCAGTGCGGC TGGTGACCGG CCCGGGTCAG GAACCGACCC GGGAGTTCTT CTCCGAGCTG
CTGCGCAGAG CCGAGGAAAA ACGCACCCTG CTTTACTATC CGGGGTCCAC CTGCCACCGC
GTCGTCTTCG GGGAATCGGA CGGCATCCCG GGCCTGATCG TGGACCGTTA TGGCGACGTG
CTCGTCATCC AGGTCACCAC CCTGGGGATG GCCCGCATGC AATCGCTGAT CCAGGAGCTT
ATGGTGGAAC TCTTCCGGCC GGCAGCCATC GTCTGCCGAA ACGATACGTC GGTGCGCAGG
CTCGAAGGCC TCCCGCTGGA GAAGGGGCTC GCGTTCGGCG AGCTCCCGGA AGACATCCGG
GTGAACATTG ACGGTCTCGA GCTCCGGGTA GACCCCCTGG GAGGCCAGAA GACCGGCCTG
TTTCTCGACC AGAGGGACAA TCGCCGCGCC CTGCTCCGCT GGATCGGAGG CAAGCGCGTT
CTGGACCTGT TTTGCTATAC CGGTGCCTGG GGACTCGCCG CCGCCCGCGG AGGTGCCTCC
CGAGTGGTTG GGGTCGACGC ATCCGCAGAA GCCGTCGACC AGGCGCGTTC CAATGCGGCG
GCAAACAACG TGGCCGACCG GTGTGAATTC ATCCGCTCGG AGGCCCTTCA ATACCTTAGA
ACCCTGAGGA AAGGCGACTT CGACGTCATC GTCCTCGATC CTCCGGCCTT CGCGAAAACC
AAGAGCGCCC TGCCGGAGGC TCAGAAAGGA TACACCGATT TGAACCGTCG GGCGCTCCTC
GCCCTTGCCC CGGGGGGCCT GCTGGTCACC TGCTCGTGCT CCTACCACAT GAGCGAGGAG
CTCTTCGCCC GAGCTCTGCT GCAGGCAGCG CGGGCCGGCG GCAGACAGCT GCGGCTCATG
GAATCGCGCG GCCAGGCGCC GGACCACCCG GTCCTGCTCG CCATGCCCGA AACCCGCTAC
CTCAAATGCT GGTTCCTGGA AGTCGTCTGA
 
Protein sequence
MQPLFLLPGR EKRILQGHRW VFNNEIDGRL PDFEPGSWVE VFSSKRVPLG RGYINPRSLI 
AVRLVTGPGQ EPTREFFSEL LRRAEEKRTL LYYPGSTCHR VVFGESDGIP GLIVDRYGDV
LVIQVTTLGM ARMQSLIQEL MVELFRPAAI VCRNDTSVRR LEGLPLEKGL AFGELPEDIR
VNIDGLELRV DPLGGQKTGL FLDQRDNRRA LLRWIGGKRV LDLFCYTGAW GLAAARGGAS
RVVGVDASAE AVDQARSNAA ANNVADRCEF IRSEALQYLR TLRKGDFDVI VLDPPAFAKT
KSALPEAQKG YTDLNRRALL ALAPGGLLVT CSCSYHMSEE LFARALLQAA RAGGRQLRLM
ESRGQAPDHP VLLAMPETRY LKCWFLEVV