Gene Sfum_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1830 
Symbol 
ID4459875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2233003 
End bp2234364 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content60% 
IMG OID639702597 
ProductCoA enzyme activase 
Protein accessionYP_845950 
Protein GI116749263 
COG category[S] Function unknown 
COG ID[COG3581] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0278863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTT CCAACGATCG TTCGTCCTTT GATCGGTTCC ACACCAGCGT CAGACAGTTC 
GATGTTTCCG GCAAGACCCT GCTGCTGCCG GACATGGCCC CTTTCGGGGC ACGGCTTCTT
GCAGCGTGCT TTCGCGCCGT CGGGGTCAAT GCCAAGGTCA TGGAGACTTA CACCGGCCTG
GCCCTGGGCA AGGAATTCAC CTCGGGGAAA GAGTGCTTCC CCTGCCAGGT GACCCTCGGC
GACATCCTGT ACCACCTCCA GAAGGAAAAG GAACGACTCG GTTCCTCCTT TTCCCCGGAC
CGGTACGTGT ACTTCATGCC GGAGGCGGAC GGCCCCTGCC GCTTCGGCAT GTATAACAAG
CTTCAGCGGC TGATCCTCGA CCGTTTCCCC GAATTCAAGG AAATTCCCAT CGTCTATCTG
TCCACCGAAG ACTCCTACGC GACGGGCGGC ATCATGCCGC CGGAGGAGTC GTCCATCTTC
CGGAAACTGA GCTACGTCGC CATCATCGTT GCGGACGTGA TGGACCGTGT TGTCTGGCGG
ATTCGGCCTT ACGAAAGCCG CCCCGGCGCC ACGGACGCCT TCATGGCCCA GGCCGTTGAC
GCCATGGCCG CAACCATCGA AGAGGTGGGG GCCGCGCTCA ATTTCCCCAG GCTTCTCGAT
CAGCTCGAAG AGGTCGTCGT CGCCGCCCGG AACATCGCCG ATCCGCGCAT ACCCCGCAAG
CCGCGTATCG GCATCGTGGG CGAAATATAC CTGCGCTGTC ACCCGGATTC GAACCAGAAC
ATCATCCGCG AGCTGGAAAA ATGCGGCGCC GAGGTCCTGG ACGCTTCCCT GGGCGAGTGG
GTCAATTTCG TCACTTTCGA GCAGGAAAGG AAATTGCGGA GGGCCTGGAA AATCGCGTGG
CTCGACCGCA ACCATTCCCG GCTCCGGAAG GTCACCCGCG CACTGTTCGG CAACCTGATC
GAGGGACTCT ACCAGCAGGT GCGGCAACAC CAGGTCTATC GAAGGGCGCT AAAGCATCTG
GACATACCGG TCGATCACAG TATACGGAAG ATCGAGCGCC GGCTGCAGCG CGACCGGCTC
TTCACCTTCG ATATCGGGAC CGAAGCGGCG CTCAGTATCG GCGGTGCTCT CGAATACGCC
CACGAGGGGT TCGACGGCGT CGTCAATGTT TTTCCCTTCA CGTGCATGCC CAGCACCATC
TGCGCCTCCA TTCTGAAGCC GCTGCTGCAT GACATGAAGG TCCCGTATCT CGACGCGCCT
TACGACGGAG CCATTCAGCC CAATCGGGAA ACCGCCCTGC GCACCTTCGT CTATCAGGCA
AAACAGCACC TTGAATCTCG CACCGCGAGA ACGAAACGAT AA
 
Protein sequence
MAVSNDRSSF DRFHTSVRQF DVSGKTLLLP DMAPFGARLL AACFRAVGVN AKVMETYTGL 
ALGKEFTSGK ECFPCQVTLG DILYHLQKEK ERLGSSFSPD RYVYFMPEAD GPCRFGMYNK
LQRLILDRFP EFKEIPIVYL STEDSYATGG IMPPEESSIF RKLSYVAIIV ADVMDRVVWR
IRPYESRPGA TDAFMAQAVD AMAATIEEVG AALNFPRLLD QLEEVVVAAR NIADPRIPRK
PRIGIVGEIY LRCHPDSNQN IIRELEKCGA EVLDASLGEW VNFVTFEQER KLRRAWKIAW
LDRNHSRLRK VTRALFGNLI EGLYQQVRQH QVYRRALKHL DIPVDHSIRK IERRLQRDRL
FTFDIGTEAA LSIGGALEYA HEGFDGVVNV FPFTCMPSTI CASILKPLLH DMKVPYLDAP
YDGAIQPNRE TALRTFVYQA KQHLESRTAR TKR