Gene Sfum_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1783 
Symbol 
ID4459895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2178216 
End bp2179040 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content59% 
IMG OID639702552 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_845905 
Protein GI116749218 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACA CCAATCAGTG GAGTTCCCAT CGGCAACGTC TGATTACAGG CGTGCTGCTG 
GGGCTTCCTC TGCTGCTCAT CATCGCGGTC GGTCCCGCCT GGAGTTGGCT TGTCCTCATC
CTGGCCGCCG TTTTACTCGG GCTTTGGGAA CTGCAGCGGT TGCTCGTTCC CGAGGGCCTG
TCCCCTCCGC TTCTCGTTTC CTACCTCACG GTCGGGCTGT CCATGCCCTT CGCAGCCTTT
GCGGCCGGGC CCTCGGGACT GCACTGCGCG TTGGTTCTGT GCCTTTTTTC CGGCTTTTTC
GGCCTGCTGG TCAGTTCGCC GCTCGACCTC CATCGGACCG ACCTACTGTC CAGGCTCTGC
CTGGGATGGC TTTACATCCC TTATCTGCTG TCTTATGTAC TGCTCATCGG AACATTGGGC
GGCGGGCGGC TCTGGCTTGT ATTCATTCTT CTCGTGATCG TTGCGAGCGA CGTCGGAGCG
TACTATGTCG GCACCTGGCT TGGACGACAC AAGCTCTACG AGCGCGTGAG CCCGAAGAAA
ACCGTTGAAG GAGCCATGGG TGGCGTAGCC GCCAGCGTTG TAACGGGGGT CGTTTTCGGG
TATGTTTGTA TGGAAGGTGT TTCCGCCGGC AGACTGGCTG TCTTCAGCGC CACGCTTGCC
GTGGTGAGCC AGGCCGGTGA TCTCTTCGAA TCGATGCTCA AACGGATGAG CGCAATAAAA
GACTCGAGCA GCCTGCTCCC GGGGCACGGA GGCCTTTTGG ACCGCCTCGA CAGCCTGCTT
TTCGCTTTTC CGACCGCATG GTTTTTCCTG GTATGGATGT TTTGA
 
Protein sequence
MFDTNQWSSH RQRLITGVLL GLPLLLIIAV GPAWSWLVLI LAAVLLGLWE LQRLLVPEGL 
SPPLLVSYLT VGLSMPFAAF AAGPSGLHCA LVLCLFSGFF GLLVSSPLDL HRTDLLSRLC
LGWLYIPYLL SYVLLIGTLG GGRLWLVFIL LVIVASDVGA YYVGTWLGRH KLYERVSPKK
TVEGAMGGVA ASVVTGVVFG YVCMEGVSAG RLAVFSATLA VVSQAGDLFE SMLKRMSAIK
DSSSLLPGHG GLLDRLDSLL FAFPTAWFFL VWMF