Gene Sfum_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1781 
Symbol 
ID4459893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2176625 
End bp2177182 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content54% 
IMG OID639702550 
Productribosome recycling factor 
Protein accessionYP_845903 
Protein GI116749216 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATG ATGTCTTTGC GGACGCTCGT GACCGGATGT CGAAGGCTCT CGACAATCTT 
GAGACCGATT ACAAACGACT GCGCACGGGC AGAGCCTCCG TTTCGTTGGT GGACGGCATC
AGAGCCGAGT ACTACGGGAC CCCTACCGCG CTGAACCAAC TGGCAACCAT CACGATTCCG
GAACCCAGGA CCATCATGAT CCAGCCATGG GACACCTCGG TGATCGGCGA GATCGAGAAA
TCGATCCTCA AGTCCGAGCT CGGGCTCACG CCCATGAGCG ACGGGAAGGT CATCCGCATC
AATATTCCGG TGCTGACCGC CGATCGTCGT CGCGAACTGG TGAAGGTGGT CAAGAAGATG
AGTGAGGAAA GTAAGGTGGC CGTCCGCAAT ATCCGGCGCG ACGTCAACGA GATGATCAAG
GATTTGAAGA AGGAGAAGGA GATCTCCGAG GACGAGCAGT TCAAGGCGCA GGAAGAAACA
CAGAGGATCA CCGACGATTT CATCAAGAAA ATTGACGTGG TTTATTCCGC CAAAGAGAAG
GAGATCTTGG AAATCTAG
 
Protein sequence
MLNDVFADAR DRMSKALDNL ETDYKRLRTG RASVSLVDGI RAEYYGTPTA LNQLATITIP 
EPRTIMIQPW DTSVIGEIEK SILKSELGLT PMSDGKVIRI NIPVLTADRR RELVKVVKKM
SEESKVAVRN IRRDVNEMIK DLKKEKEISE DEQFKAQEET QRITDDFIKK IDVVYSAKEK
EILEI