| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1768 |
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| Symbol | |
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| ID | 4459915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2160717 |
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| End bp | 2163488 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702537 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_845890 |
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| Protein GI | 116749203 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.706396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCTG GCATGAGGAG CGCGAGAAGC AAAATGGAGC GTATGCGGAA GGTCTGGAAG
ACGGCGCTTC CGGTCGTCAT CAGTCTTGCG ATTCTCGCAA GCGGGCCGGC GGCGGCAAGG
ATGGAAATCC GGGATGGACG GAAAGCCTTC TTCAAATCGG ACTACGAGGA GGCCCTTTCG
AAGTTTCGGG AGGCATTCGA CGACGCGTCG CGGTCGGGAA ACAAGCTGAA GATGGGCAGG
GCGCTGGCGA ACATGGCGAT GGTGTATCGC AGCATCGGCC AGAACAAGAA AGCCCTGGAA
CTGCTCGACA GGGCACTGGG AATCGCCCGG GATATCAAGT CGAAGGAACT GGAGGGCATG
GCCCTCGCAA ACATGGGTGG GGCGACCGCA AATCTCGGAG ATTACGAAAA GGCTCTGGAG
TACGACTTAA GGGCGTTGGC CCTTAGAAGG GCCACAAACA ACAGGAGGGG CGAGGCGGCC
GACCTCACAC ACATTGGAGC CATCTACCGC TCCCTCGGAC AGTACGAAAA AGCCATCGAC
CACGACAGGC AATCCCTGGC CGTTTCCAGC ACGGTCAACG ACCGATTCCG GCAGGCGATG
GCCTTGTCCA ACCTGGCCAG AGACTACACC GGGCTCAAAC AATACGACAC GGCCTTGCAG
TTTCACGAAC AATCCCTCGC GGTCCGGAAG GACACTTCGG ATCTGCGAGG CCAAAGCGAC
GACCTGATGG GCATGGGTTT GATCTATCTG CGTCTGCGCC AGTACGACAA GGCCCTCGAT
TACAGCAGGC AGGCGCTGGC CCTTGCGAGG CGTATCAGCT ACCCGTTGGG GCAATGCGGC
GCCCTGAACC GGATCGGGCA TACACTGTGC CGGCTCGGCC GTTTTGAAGA AGCGCGACAG
CCCTTTACGG AGTCGAGGGC GATCAGTGAG AAAGCGGGCC TGCCGGAGCC TCTGTGGAAT
TCACAACGGG GCCTTGGCCT GGTAGCCGAC AGACAGCACA GGGCCGACGA TGCGGTGTCG
TTTTACTTCC AGGCGATCGA CACCATCGAG TCCATGAGGT CCCGGATCCG CGGCGGTGAA
GCCCAAATTA CCTTCATGCA GGAGAAGTTT GGAGTCTACA ACGAATTGAT GGCACTCCTG
TGGAGAATGC ACGTCAATTC CCCGCATTCG GGCTACGATC GAAGAGCGTT TGAGGTTTTC
GAACGCAAGC AGGGAAGGGT CCTGCTCGAT CAGATCGGCA AGAGCGCGGT TCGCAGCTTT
TCGGGACTCC CGGAAAGCAT CGGTGCAAGG CTGATCGAGC TCGAAGGGCA ACTGGACAGC
CTCAAGTCCA CATTCGGGGA TGAGCCCGAG AATCAGACTC CGGACCGGAC AGCCTTGGTG
GACGAGCAGA TACGCAGGAC CAGGCAGGAA CTGGAGGCGC TGGAGGCTAC GGTCAAAAGG
GAGTATCCGA GGCACTACGA CTTGATGCAC CCGAGGCCGG CCACTCTCGA CGAGATACAA
AAGCAGGTCC TGAAGCCCGA CGAGGTCATC CTCGCCTATG AAATGCTGGA AAAGGGGACC
CTCCTTTGGA TCATCGCCAC GAATCGGTTT CAGCTCGTCA GGGTGGACGC GGGCGAGCAG
GCGATCAACT GGAAGGTCGC CGAAATCAGG AATGCCCTTC ATTCGGTCCT GGAAGAAGCA
GGAAGCGGGA AATCGGGATC GCTCTCCGAG TCCGCCGTCG GCAGTTCGGC AGACGAGCTC
CGGCGACGGG CGGGCGAGCT TCACGATTTG CTCATTCCTG CCAAGGCCCG AGAATTGATA
TCGAGCGCAA AAGTCCTTCT GGTCGTTCCC ACGGGCAGTC TCTACACCAT CCCGTTCGAG
ATGCTGGTGC GACCGGCGGC GACGAAAACA AGTCGAAAAA CCCAATATTT GATCGAAAAT
CAGGCGATTC TCTACCTTTC ATCCGCTTCG CTGCTCAAGA CGCTTAGGGA GGCGGCGGCA
ATCAGGAAGG CGGGGGCGGA CTATCCGTTG CTCGTCTTCG CCAATCCATC CTATCCAACA
GCCCCGATCC CGCACGGGAT GACCGTGCCG CTGTCGAAAC GGACCGATGC CGGCGAATCC
GCTTCAGCCG GCAGCGGCTT CATGGAATTG AGGACCGCCG GTTACACCGA AATGATGAAA
GGGATTTTCC AGGAATTGCC CGATACGGAA GATGAGGCCA GGGAGATCAA GTCCATTTTC
GGCGCTCCGG ATTCGAGCAA TCCCGTACTG TCGCGGCAGG CCGCGTCCCG GAGCAATCTT
CTTGACCTCG ATGCGAACCG GAAGCTCGCC GAATACCGGT ATGTGGTGTT TTGTTGTCAC
GGCATCCTGC CCGAGGAAAT CGACGAAGTG CAACAGCCCG CCCTCGTTCT GTCCCACCCG
GACCCCGTGA CGAGACGGGA AGGATTCGTC ACCATGGCTG ACGTTTTTTC GTTGCACCTG
AACGCGGAAC TCGTAACCCT GTCCGCCTGC AACACGGGGA GCGGCAAGGT TCTCAAGGGC
GAAGGGATGA TCGGTCTGAC GCGATCCTTC ATGTATGCGG GAACCCCCGC CGTTGCCGTC
ACGCTGTGGT CCGTTGAATC GAATTCGGTG AGGCTTTTGA ACGTCGGGCT CCACCGGGGT
CTGCAATCGG GCAAGCGGCC CGCGGAGGCC CTGCGCGACG CCAAGCTGCG TATGATTCGA
GGAGACCACG GCGCTATCTA CCAACATCCC TTTTTCTGGG CTCCACTGGT GCTCTTCGGG
GATGGCCGCT AG
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| Protein sequence | MQPGMRSARS KMERMRKVWK TALPVVISLA ILASGPAAAR MEIRDGRKAF FKSDYEEALS
KFREAFDDAS RSGNKLKMGR ALANMAMVYR SIGQNKKALE LLDRALGIAR DIKSKELEGM
ALANMGGATA NLGDYEKALE YDLRALALRR ATNNRRGEAA DLTHIGAIYR SLGQYEKAID
HDRQSLAVSS TVNDRFRQAM ALSNLARDYT GLKQYDTALQ FHEQSLAVRK DTSDLRGQSD
DLMGMGLIYL RLRQYDKALD YSRQALALAR RISYPLGQCG ALNRIGHTLC RLGRFEEARQ
PFTESRAISE KAGLPEPLWN SQRGLGLVAD RQHRADDAVS FYFQAIDTIE SMRSRIRGGE
AQITFMQEKF GVYNELMALL WRMHVNSPHS GYDRRAFEVF ERKQGRVLLD QIGKSAVRSF
SGLPESIGAR LIELEGQLDS LKSTFGDEPE NQTPDRTALV DEQIRRTRQE LEALEATVKR
EYPRHYDLMH PRPATLDEIQ KQVLKPDEVI LAYEMLEKGT LLWIIATNRF QLVRVDAGEQ
AINWKVAEIR NALHSVLEEA GSGKSGSLSE SAVGSSADEL RRRAGELHDL LIPAKARELI
SSAKVLLVVP TGSLYTIPFE MLVRPAATKT SRKTQYLIEN QAILYLSSAS LLKTLREAAA
IRKAGADYPL LVFANPSYPT APIPHGMTVP LSKRTDAGES ASAGSGFMEL RTAGYTEMMK
GIFQELPDTE DEAREIKSIF GAPDSSNPVL SRQAASRSNL LDLDANRKLA EYRYVVFCCH
GILPEEIDEV QQPALVLSHP DPVTRREGFV TMADVFSLHL NAELVTLSAC NTGSGKVLKG
EGMIGLTRSF MYAGTPAVAV TLWSVESNSV RLLNVGLHRG LQSGKRPAEA LRDAKLRMIR
GDHGAIYQHP FFWAPLVLFG DGR
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