Gene Sfum_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1764 
Symbol 
ID4459911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2155421 
End bp2156656 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content62% 
IMG OID639702533 
Productputative RNA methylase 
Protein accessionYP_845886 
Protein GI116749199 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.37357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA CTTACACAAC CGAGTACCTT GAGAGCAAAC GTTACCAACG GCACATCAAA 
CGGCACGTCC TGGCCCCGGT GCATCGTTTT GCCGCCGTGA CTCCGCCGGA GCTTGCGGCC
TTGTGCCGGC AGGAAGCCGA AATGGCGGGA TTCGACGTCA CCGGGCTCAG TGATGCGGGA
GTCGAATTCA CCGGGAACTT CGGCGCATGC TATGAGGCCA ATTTGTGGCT GCGGACCGCA
AGCCGCATCC TCTGCCGGCT TCCGGCATTC CGGGCGGGCG TCAGGGAGGA GCTGTTCGGA
AAGGTGTCCG GCATCCCGTG GGAATTGTGG CTGAACCGGA GCGTTCCGGT TCGCGTGGAA
ACACACGTTG AACATTCGCG AATCAATCAT GAAGGGATGG TGCTCGAAAC GGTTCTTGAC
GGGCTTCGAA GGCGTTTCAG GGAAAAGGGG ATCGTTCCGC CACCGGAATG GGACCGTTCC
CGGGGGCAGC CGGGGAGCGA ATCCGATGAG AATTCACGGA AACAACGCAT CCTGGTCCGT
CTTGTCAGGA ACCACTGTGA GCTCTCGCTG GACACCACCG GGGATCATCT GCACCGGCGG
GGTTACAGGA TGCGCCATGC TGGGGCTCCA ATCCGGGAAA CTCTCGCTGC GGCGATTCTA
ATGAAGGCGG GTTGGAATGG AAACACGCCG CTGGTCGACG GTATGTGCGG GGCGGGAACA
GCAGCCGTGG AGGCGGCCCT GCTGGCGCGC CGGATGCCCC CCGGACTGGG GCGGTCGTTT
TTGTTTCAGT CCTGGCCGTC CTACCGGGAG AAGACTTGGG AATTCCTTCT GCGCAAAGCC
CGGGAGAAGA TGTCCGCCCA TCCCGCGGCT CCGATCGTTG CCCTTGACCG AGACCCTCGA
GCCCTGGCGG TTGCGCGTGA GAATGCCCGG AAAGCCCATA CCGAAAAGGA GATCATCTGG
CGGGAAGAGG ATTTCTTTGA TTTTCAACCC GCTCGAATGG GGCTGTCCGA AGGATTGCTC
ATTTTGGACC CTCCCTACGG CAAGCGGCTG CCTGGGCCGG ACCGTGGGTT CCACGAACGG
CTTGGCGCTC ATTTGAGGCG CTTGTACACG GGATGGCGGA TCGCGGTGCT TTGCCCCGAA
CGCGGGATCG CCGTCACGGG GATCCGGGCC GTGCGATATT GGAGGATTGT CCACGGCGGG
ACGTCGATCT ACGTTGCCAT GGCCAGGGTG GAATGA
 
Protein sequence
MTETYTTEYL ESKRYQRHIK RHVLAPVHRF AAVTPPELAA LCRQEAEMAG FDVTGLSDAG 
VEFTGNFGAC YEANLWLRTA SRILCRLPAF RAGVREELFG KVSGIPWELW LNRSVPVRVE
THVEHSRINH EGMVLETVLD GLRRRFREKG IVPPPEWDRS RGQPGSESDE NSRKQRILVR
LVRNHCELSL DTTGDHLHRR GYRMRHAGAP IRETLAAAIL MKAGWNGNTP LVDGMCGAGT
AAVEAALLAR RMPPGLGRSF LFQSWPSYRE KTWEFLLRKA REKMSAHPAA PIVALDRDPR
ALAVARENAR KAHTEKEIIW REEDFFDFQP ARMGLSEGLL ILDPPYGKRL PGPDRGFHER
LGAHLRRLYT GWRIAVLCPE RGIAVTGIRA VRYWRIVHGG TSIYVAMARV E