Gene Sfum_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1754 
Symbol 
ID4459936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2146605 
End bp2147375 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content56% 
IMG OID639702523 
ProductABC-type transport system involved in multi-copper enzyme maturation, permease component 
Protein accessionYP_845876 
Protein GI116749189 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.513329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.144736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGTT TTTGGTCGGT CTATCGCAAA GAGCTTTACA GTCTGTTCGC TTCCCCGATT 
TTTTACGTGG TGGCGTTCAT CTTCCTGGTG ATATCGGGTT ATTTCTTTTA CAGCATCGTC
GCCTACTACA ACGTGCTGAG CTACCAGGCG AGCCAGAATC CCATGATGGC AAGGCAGTTC
AACATCCTCG AGATGATTTT TCGTCCGTTT TTTCTGGATC TCAGCGTGGT GCTGCTCCTG
ATCGCGCCTT TGCTCACCAT GAGGCTGTTC GCCGAGGAGC GCAAGGCGGG AACCCTGGAG
CTGCTCTTCA CTTATCCCAT CTCCGACTGG GCGATGGTTC TCGCCAAGTT CAAGGCCGTG
ATGAGCGCCT TTGGCATCAT TCTGCTGGGG ACGGTTCCCG GTGTGCTTTT TGTGAGCGTT
CTGGGGAGTC CTTCCTGGAA GCCGGTTGCC TGTGCCTACC TGGGCATTTT CCTTCTCGGG
GGCTCGTTCA TCTCCCTGGG CGTGTTCACT TCCTCCCTCA CCCAGAACCA GATCATCGCC
GCAGTGCTGT CTTTCGGCGG ACTGCTCCTT TTGTGGGTCA TCGGCTGGCT CAAGAACGTC
GTCGAATCCC CGGTCGGCGA AGTGGCCGAC TACCTCTCGT TTGCCAGGCA CTTCGACAGC
TTCGCCAAGG GGGTCCTGGA TTCGCGGGAT CTGCTGTTTT ATATCCTGTT CACCGTTTTC
TTCCTGTTCC TGACCCTGAG ACAGATGGGG TCCTATCGCT GGAGGGGTTA G
 
Protein sequence
MKGFWSVYRK ELYSLFASPI FYVVAFIFLV ISGYFFYSIV AYYNVLSYQA SQNPMMARQF 
NILEMIFRPF FLDLSVVLLL IAPLLTMRLF AEERKAGTLE LLFTYPISDW AMVLAKFKAV
MSAFGIILLG TVPGVLFVSV LGSPSWKPVA CAYLGIFLLG GSFISLGVFT SSLTQNQIIA
AVLSFGGLLL LWVIGWLKNV VESPVGEVAD YLSFARHFDS FAKGVLDSRD LLFYILFTVF
FLFLTLRQMG SYRWRG