Gene Sfum_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1744 
Symbol 
ID4459961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2133914 
End bp2135056 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content61% 
IMG OID639702513 
Productradical SAM domain-containing protein 
Protein accessionYP_845866 
Protein GI116749179 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00743194 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000183859 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCATCGT TCGAACAGGG CCCCATCAGG CCTCCCAGTG AAGCGGGCAG TCTGCTCCTT 
CGATTCACCC GGAATTGCCC CTGGAACAAG TGCACGTTCT GCCCGGTCTA CAAGCGCAGG
GAATTCAGCC GGCGATCCCT CGAGGAAATC AAGCAGGATA TCGACGCCGT TTTCGAAATC
ATCGAGGCGT TGAAAAAGCT CTCCTTTTCC CTCGGGTTCG CCGGGGCAAT GAACCGCGAG
GTGCTGAGCG CCGTTTTCAG CGATCCTTCT CACAACGATT GCTTCCGCCA CGTGGCCTAT
TGGCACATCG TCGGAAACGG GACCGTCTTC ATCCAGGACG CCAACAGCCT GATGCTCCCC
TCCCCCATGC TGATCGCCGC CCTGCAGTAC CTGAGGAGCA AGGTCCCGGG CATCACCCGT
ATCACGTCCT ACGCCCGCAG CAGCACGCTC GCTCGAAAGC GTGTCGAGGA CTTGAAGGAA
ATGCGGGCCG CCGGTCTCGA CCGCATCCAT GTGGGCATGG AAAGCGGCGC GGATCGCGTG
CTGGAATTCG TCAAGAAGGG CACCACCGCG GCCCAGCACA TCGAAGGGGG GCGCAGGGTG
ATCGAAGCCG GCATGGAGCT CTCCGAATAC ATCATGCCGG GGCTCGGCGG AGTCGCGATG
TCAGAGGAAC ACGCCGTCGA ATCGGCGCGG GTGCTGAACG CCATAGACCC CCATTTCATC
CGCCTGCGCA GCCTGCGGAT ACCGCCGCGC GCGCCGCTTT ACAAGGACAA GGCGGAGGGC
CGTTTCGTCC CCCTGTCCGA CGATGACGTC GTCAGGGAGA TACGCCTCTT CATCGAGACC
CTGGACGGCA TTCACAGCAC TTTGGCTTCC GATCACATCA TGAATCTGCT TCAGGACGTG
GAAGGCAGGT TTCCCCAGGA CAAGCCGGCG ATGCTCGCGA CCATCGACCG CTACCTGGCG
CTGCCGCTTG AAGAACGGCA ACTTTACAGG CTGGGCCGGC GCGGGGGAGC GCTTGTGTCT
CTCGACGATC TGAATGATCC CGTCATGCGG GGAAGGCTTC AACTGGCCAT GAAAGAATTG
GTGCAGCAGA CGGGCGGCGA CCTGGAAAAG CTCATCACCG AGCTTGCGGA CCGGTATATA
TAG
 
Protein sequence
MASFEQGPIR PPSEAGSLLL RFTRNCPWNK CTFCPVYKRR EFSRRSLEEI KQDIDAVFEI 
IEALKKLSFS LGFAGAMNRE VLSAVFSDPS HNDCFRHVAY WHIVGNGTVF IQDANSLMLP
SPMLIAALQY LRSKVPGITR ITSYARSSTL ARKRVEDLKE MRAAGLDRIH VGMESGADRV
LEFVKKGTTA AQHIEGGRRV IEAGMELSEY IMPGLGGVAM SEEHAVESAR VLNAIDPHFI
RLRSLRIPPR APLYKDKAEG RFVPLSDDDV VREIRLFIET LDGIHSTLAS DHIMNLLQDV
EGRFPQDKPA MLATIDRYLA LPLEERQLYR LGRRGGALVS LDDLNDPVMR GRLQLAMKEL
VQQTGGDLEK LITELADRYI