Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1727 |
Symbol | |
ID | 4459979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2113320 |
End bp | 2113964 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639702496 |
Product | hypothetical protein |
Protein accession | YP_845849 |
Protein GI | 116749162 |
COG category | [S] Function unknown |
COG ID | [COG4832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.360385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCCG CTGCAGGAGT GCTTGTGACA ACGATAGATT TCAAGAAGCA GCACAAAGAT CTATACAGGC CGCCCGCTGG CTGGCCCGTG CTTGTCGATG TTCCGGCGAT GGTCTTCCTC ATGGCCGACG GCCGGGGAGA TCCCACCAAG ACTCCGGAAT TCGCCCGAAC GGTTGAGACC CTGTTCGGTA TTGCGTACAG CCTGAAGTCC ACGTTCAAGA AGGCCGGAAC CTTCCCGGAC TTCGTTGTTC CTCCCCTGGA ATGCCTTTGG TGGACGGATG ATTCGTCTTC CTTCTCCTTT CGCGATCTGC ATTCCTGGCG ATGGACCCTG ATGATCCGAC AGCCCGAACA CGTTGAACCC GTCATGGTCG CGGAAGCCCG AAAGCAGTTG ATGGTGAAGA AAAAGGACCG TGCACTCCCG GATGTCAGGC TGGAGGCTTG CGAGGAAGGA CCGGCCGTAC AGGCATTGCA TGTCGGAGCC TACTGCGATG AGCATCGGAC CATCGAGAAG ATGCACGCCC TCATGATGGA GAACGGGTGG ATCGCACGAG GAAAGCACCA CGAAATATAC TTGAACGATC CGCGCCGGAC GGTACCCGAA AAACTGAAGA CCATCCTTCG TCAGCCGATA TCCCGGAATG AATGA
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Protein sequence | MEPAAGVLVT TIDFKKQHKD LYRPPAGWPV LVDVPAMVFL MADGRGDPTK TPEFARTVET LFGIAYSLKS TFKKAGTFPD FVVPPLECLW WTDDSSSFSF RDLHSWRWTL MIRQPEHVEP VMVAEARKQL MVKKKDRALP DVRLEACEEG PAVQALHVGA YCDEHRTIEK MHALMMENGW IARGKHHEIY LNDPRRTVPE KLKTILRQPI SRNE
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