Gene Sfum_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1727 
Symbol 
ID4459979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2113320 
End bp2113964 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content57% 
IMG OID639702496 
Producthypothetical protein 
Protein accessionYP_845849 
Protein GI116749162 
COG category[S] Function unknown 
COG ID[COG4832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.360385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCCG CTGCAGGAGT GCTTGTGACA ACGATAGATT TCAAGAAGCA GCACAAAGAT 
CTATACAGGC CGCCCGCTGG CTGGCCCGTG CTTGTCGATG TTCCGGCGAT GGTCTTCCTC
ATGGCCGACG GCCGGGGAGA TCCCACCAAG ACTCCGGAAT TCGCCCGAAC GGTTGAGACC
CTGTTCGGTA TTGCGTACAG CCTGAAGTCC ACGTTCAAGA AGGCCGGAAC CTTCCCGGAC
TTCGTTGTTC CTCCCCTGGA ATGCCTTTGG TGGACGGATG ATTCGTCTTC CTTCTCCTTT
CGCGATCTGC ATTCCTGGCG ATGGACCCTG ATGATCCGAC AGCCCGAACA CGTTGAACCC
GTCATGGTCG CGGAAGCCCG AAAGCAGTTG ATGGTGAAGA AAAAGGACCG TGCACTCCCG
GATGTCAGGC TGGAGGCTTG CGAGGAAGGA CCGGCCGTAC AGGCATTGCA TGTCGGAGCC
TACTGCGATG AGCATCGGAC CATCGAGAAG ATGCACGCCC TCATGATGGA GAACGGGTGG
ATCGCACGAG GAAAGCACCA CGAAATATAC TTGAACGATC CGCGCCGGAC GGTACCCGAA
AAACTGAAGA CCATCCTTCG TCAGCCGATA TCCCGGAATG AATGA
 
Protein sequence
MEPAAGVLVT TIDFKKQHKD LYRPPAGWPV LVDVPAMVFL MADGRGDPTK TPEFARTVET 
LFGIAYSLKS TFKKAGTFPD FVVPPLECLW WTDDSSSFSF RDLHSWRWTL MIRQPEHVEP
VMVAEARKQL MVKKKDRALP DVRLEACEEG PAVQALHVGA YCDEHRTIEK MHALMMENGW
IARGKHHEIY LNDPRRTVPE KLKTILRQPI SRNE