| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1724 |
|---|
| Symbol | |
|---|
| ID | 4459976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2109010 |
|---|
| End bp | 2110668 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639702493 |
|---|
| Product | ferredoxin-dependent glutamate synthase |
|---|
| Protein accession | YP_845846 |
|---|
| Protein GI | 116749159 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.132222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.993871 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCAA ACGGAACCCT TACCCCTTCC ACTCTAAGCG TCAAGGACCT GCTGTGGCAG
ATTCACTGGG AGAAGGACAA GTGCACGCTG TGCGGCCGCT GCACGGCGGT GTGCCCGGTG
CACGCTATCG AACTGGGGGT GCACCGGAAG CGATCGGTCC GGCTCCCGGC GCTCGCCGAA
ATCGGGCCCG GCAGCGGCGG ATCGAACGTG TACGAGGTCT ACCACGGCAT CCGGCAGAAG
ACCGACCCGG CCTATGCATG CGTGGGTTGC GCCACGTGCA GCCTGGTTTG TCCCAATGAC
TGCATCGCGC CCTACCGGAG CGATGAGGTG GACAAGCTGC GCTTTCACAT CAATCGGGGC
GGCCAGGCGC GCAGTCGAGG CGGCCGCAGG AATGTGCCCG AATTCGCCGG GGGCAGCGTT
CTGGACCGGA TCAAATTCAT CCGTATCTCG ATGCTCACGG ACCCGGCGCT CGACGCCGGG
CGGCACGAAT TCGAGCTGCG CACCCTGCTG GGCAGGGTCC TGCCGCCCGA GGAGAATCTG
AGGCTCTACA GGGAACAGGG ATGGATCCCC CCCGTGCGTG AGATCTATCC GCTCATCATC
GGCGGCATGT CCTTCGGCGC GCTTTCCCCC AACATGTGGG AAGGCTTGCA GATGGGTATC
GCCTACCTCA ACGAAGAGAT CGGCATGCCG GTTCGTATGT GTACCGGCGA GGGCGGGTGC
CCTCCGCGGC TGCTGAGGTC CCGTTTTCTC AAGTACGTGA TCCTCCAGAT CGCCAGCGGC
TACTTCGGTT GGGACGAAAT CGTGCACGCC CTGCCGCACA TGAAGGAAGA CCCCTGTGCC
GTGGAGATCA AGTACGGCCA GGGGGCGAAA CCCGGGGACG GCGGGCTGCT GATGTGGTAC
AAGGTGAACA AGCTCATCGC CGCCATTCGC GGCGTGCCGC CCGGAGTGAG CCTGCCGAGC
CCGCCGACCC ACCAGACCAA GTATTCCATC GAGGAAGCGG TGGCCAAGAT GATCCAGTCC
ATGTACATGG CCTGGGGTTT CCGCGTCCCC GTCTACCCGA AGATCTCGGG GACCTCGACG
GCCCTGGCGG TCCTTAACAA CCTGACCCGA AACCAGTATG CCGGGGGCCT TGCCATCGAC
GGCGAAGACG GAGGGACCGG GGCCGCATAC AACATCTCGA TGGACCACAT GGGACATCCC
ATCGCGAGCA ATATCCGCGA CTGCTATCTC AACCTGGTGA AACTGGGCAG ACAGAACGAG
ATTCCACTCT TTGCCGGCGG CGGCGTGGGC AAGAACGGCA AGCTGGCGGC AAACGCGGCC
GCCCTCATCA TGCTGGGGGC GAGCGGCGTC CAGTGCGGCA AGTACATCAT GCAGGCAGCC
GCAGGCTGCG TCGGGTCGGA ATCGGATCGC TGCAACGTGT GCAACGTCGG TTTGTGTCCC
AAGGGCATCA CTTCCCAGGA CCCGAGGCTC TACCGGCGCA TCGATCCCGA GAAGGTGGCC
GAACGCGTGG TGGACGTTTT CCTGAGCTTC GATATGGAGC TGAAAAAGAT CGTGGCGCCG
CTCGGCCGTT CCACATCGCT CCCCATTGGA ATGTCGGACG CTCTGGCCAT CAACGATGCC
GATGCCGCCC AGCGCCTGCA GATTCAATAC GTCGTCTAG
|
|---|
| Protein sequence | MLSNGTLTPS TLSVKDLLWQ IHWEKDKCTL CGRCTAVCPV HAIELGVHRK RSVRLPALAE
IGPGSGGSNV YEVYHGIRQK TDPAYACVGC ATCSLVCPND CIAPYRSDEV DKLRFHINRG
GQARSRGGRR NVPEFAGGSV LDRIKFIRIS MLTDPALDAG RHEFELRTLL GRVLPPEENL
RLYREQGWIP PVREIYPLII GGMSFGALSP NMWEGLQMGI AYLNEEIGMP VRMCTGEGGC
PPRLLRSRFL KYVILQIASG YFGWDEIVHA LPHMKEDPCA VEIKYGQGAK PGDGGLLMWY
KVNKLIAAIR GVPPGVSLPS PPTHQTKYSI EEAVAKMIQS MYMAWGFRVP VYPKISGTST
ALAVLNNLTR NQYAGGLAID GEDGGTGAAY NISMDHMGHP IASNIRDCYL NLVKLGRQNE
IPLFAGGGVG KNGKLAANAA ALIMLGASGV QCGKYIMQAA AGCVGSESDR CNVCNVGLCP
KGITSQDPRL YRRIDPEKVA ERVVDVFLSF DMELKKIVAP LGRSTSLPIG MSDALAINDA
DAAQRLQIQY VV
|
|---|
| |