Gene Sfum_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1718 
Symbol 
ID4459970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2100585 
End bp2101541 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content62% 
IMG OID639702487 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_845840 
Protein GI116749153 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.818272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.619899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATAC TGGTCACCGG TGGGGCGGGA TACATCGGCT CCCACACTTC GAAGCTTTTG 
AGAAAGGCGG GGCACACGCC CATCGCGTTC GACAATCTCT CCAACGGCTG GGCCGAACTG
GTCAGGTTCG GTCCGTTCGT ATTCGGTGAC ATCCGCAACG AGGAAGCGCT TGCCCGGGCA
CTCGAAGTCT TCAAGGTGGA TGCCGTGATT CATTTTGCGG CGAAAGCCTA CGTGGAGGAG
TCCACCCGGC TTCCCGAAGA GTACTTCGAC AACAACGTCG GCGGAACCGT GGCCCTCCTG
AAGGCCATGA AACGGGCCGG GACGAAGACC CTGGTGTTCT CGAGCTCTTG CGCCACCTAC
GGCAACGCGC GAACCCCGAC CATCAAGGAA AACCATCCCC AGGAGCCGAC CAATCCCTAC
GGCCTGTCCA AGCTGATGTG CGAACAGGTG ATTTCCACGG TGGCCCCGGT GGCGGGCATC
CGTTTCGCCG CTCTGCGCTA TTTCAACGTC ATCGGAGGCG ATCCCGAAGG GGAGGTCTAC
GAGCGGCACG AACCGGAAAC GCACGTTCTG CCGAACCTGA TGAAGGCCGG TCTGTCCGGC
GCGGAGTTTT CACTGTACGG CACGAACCAT CCGACACCCG ACGGCACCGC GGTTCGGGAC
TACGTCTACG TCATGGACCT TGCGGCGGCG CACGTCAAGG CGCTGGATGT CTTAAGAGCA
CGGGACCGGC TGATCTCCAA CGTCGGCAGG GGCCGCGGGA CTTCCGTGCG CGAACTGCTG
GAAATCGTGC GTCGGAACGT GAAGGCCGAA CTGAACGTGG TGGAAAAACC CATCCGCCCG
GGCGACCCGC CGGAACTGGT GGCCGACAAC ACCTACCTGA AGACCTGGTT CGATCACGAG
TTCAAGAGCA CGGCCGATGT AGTGAAGGAG CTTGCCGGGA CATCACGAGC GCGGTAG
 
Protein sequence
MNILVTGGAG YIGSHTSKLL RKAGHTPIAF DNLSNGWAEL VRFGPFVFGD IRNEEALARA 
LEVFKVDAVI HFAAKAYVEE STRLPEEYFD NNVGGTVALL KAMKRAGTKT LVFSSSCATY
GNARTPTIKE NHPQEPTNPY GLSKLMCEQV ISTVAPVAGI RFAALRYFNV IGGDPEGEVY
ERHEPETHVL PNLMKAGLSG AEFSLYGTNH PTPDGTAVRD YVYVMDLAAA HVKALDVLRA
RDRLISNVGR GRGTSVRELL EIVRRNVKAE LNVVEKPIRP GDPPELVADN TYLKTWFDHE
FKSTADVVKE LAGTSRAR