Gene Sfum_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1677 
Symbol 
ID4459999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2056431 
End bp2057174 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content61% 
IMG OID639702446 
ProductABC transporter related 
Protein accessionYP_845799 
Protein GI116749112 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTA TTCGCAACCT CAAGTGTTTT TACGGACGGA TCCGCGCGGT CAGCGGTGTG 
AGCCTCTCCG TGCGCCGGGG GGAAATCATT GCCCTCATCG GAGCGAACGG GGCCGGCAAG
AGCACACTGC TCAACGCGAT CTGCGGTTTG CATCCCCAGT GGAACGGCGA AATCCTGATC
GAGAAGCAAT CGCTGAGCGG GTTGAAGCCG CCTGACATCG TCAAGATGGG AATCAGCCTC
GTTCCCGAAG GAAGGATGCT GTTCCCGCCG CTCAGCGTCA TCGACAACCT GAAGCTGGGT
GCGTACGTCC GGTACCGGAA AAAGGAGCAT CGGGAGATCG AGGGCGACCT CGGCACCGTG
CTCGAGTTGT TCCCGGTATT GAAGGAAAGG ATGAAGCAGC CCGCGGGGAT GCTTTCGGGC
GGGGAACAAC AGATGCTCGC CATCGGCCGT GCGCTCATGG CACGCCCCCG TCTGCTGCTG
CTCGACGAGC CTTCCATGGG GCTGGCTCCC TTCCTGGTGC GGTTGATCCT CGACGTGCTC
GTCCAGCTCA AAGGGCAGGG AATGACGGTT TTGCTCGTCG AGCAGAACGC GCGCGCCGCG
TTGCAGATCG CGGACCGAGG CTACGTTCTG GAGAACGGGA AGGTGATTCT CGACGGCAAT
GCTTCGGAAC TGCTCACGGA CCATGACGTC AAGCGCGCGT ACCTGGGCAA GGACTATCGT
GAATTCTACG AAGGGAGGGC CTGA
 
Protein sequence
MLRIRNLKCF YGRIRAVSGV SLSVRRGEII ALIGANGAGK STLLNAICGL HPQWNGEILI 
EKQSLSGLKP PDIVKMGISL VPEGRMLFPP LSVIDNLKLG AYVRYRKKEH REIEGDLGTV
LELFPVLKER MKQPAGMLSG GEQQMLAIGR ALMARPRLLL LDEPSMGLAP FLVRLILDVL
VQLKGQGMTV LLVEQNARAA LQIADRGYVL ENGKVILDGN ASELLTDHDV KRAYLGKDYR
EFYEGRA