Gene Sfum_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1676 
Symbol 
ID4459998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2055172 
End bp2056428 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content60% 
IMG OID639702445 
Productphenylacetate--CoA ligase 
Protein accessionYP_845798 
Protein GI116749111 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCT GGAATCGCAG GGATGAATGC TACGATGCGG ACGAGCGACT CCAGCAGCAG 
ATGGAGCGTC TGCAGAGCGC GCTCAACCGA GCCTACAACG TTCCCTTCTA CCGGAATCAT
TTTGCCCGGC ACGGGGTTGA GCCTTCCGTA GTGGAAAGCA TCGAGGACCT GTCCCGCATT
CCGTTCATCG AGCCGTGCCA TTTCAGTGAG AATTACCCCT ACGGCCTCTT TGCGGTGCCC
CTGCGCGATA TCGTGCGCAT CCACACCGCG CGCGGCAACG GCCCTCTGCC GGTGGTGAGC
GGCTACACGA AAAAGGATCT GCTGATTTGG AGGGAACTGG TGGCACGTGC ATTGACGGCC
GCCGGTGTGT CCTCCACGGA CATTCTGCAG GTCGAGCTCG ACCCGGGCCT GGCCAACTGG
GGGCGCGACT ACAAGGACGG GGCGGAATCC GTGGGCGCCG GCGTCATTCC GATGACCACA
CTGCCCCCCG AAAAGCAGTT GATGATCCTG AAGGACTACA AGACTTCCGT TCTCGTCACC
AGCGCGTCGG GGGCGGAGCA ACTGGTCTAC CACCTGTTCC GGGCGAACCT GAATCCCAAC
GAGCTCGCCC TCAAGACGCT CATCCTCGTG GGTGACGCTC CCGGAGACAA TGTCCGGGGC
AATCTGGAGG AGCAGCTCCA TGTGCGCGCG TGGCTGCACC ATGGACTGAA CGAAGTGCCG
GGACCGGCTT TGGGATTCGA GTGCGAGGAG CGCAACGGGC TCCATGTCAG TGAGGACCAC
TTCCTGATCG AAGTCGTCAA TCCCGATACC GGGGAACTCG TGAAGGCCGG CGAGGAAGGC
GAACTGGTAC TTACGACCCT GACCACGCGC GCCTATCCCT TGATTCGGTT TCGCACCGGA
GACCGGGTCC GGCTTCTGCA CGGCGCCTGT CCCTGCGGAC GCACTCTGCG ACGCGTGGAA
TGGCTGCCCT ATCGCGCCGA CGACATGATG GTGATTCGCG GCGTGAAGGT CTATCACAAA
CAAATCTTTC ACATTCTCAC GCGTGAACTG GGATTCGAAC CCCCTCTCTA TCGTTTCATG
GCTGTGAAAC AGCAGATGAT GGAATACCTC GAGGTTTCCC TGGGCGTGAA CGAGAGCATC
TTTTCCGATG AGATCAAGGA AATGCAGAAG CTCTCTCAGA AGCTCTCCGA CGAGCTGTCG
TTGGAAATCG GCTTGCCCGT CGCCATCAGA CTCAAGGAGC AGGGGTCTTT CACATAA
 
Protein sequence
MPIWNRRDEC YDADERLQQQ MERLQSALNR AYNVPFYRNH FARHGVEPSV VESIEDLSRI 
PFIEPCHFSE NYPYGLFAVP LRDIVRIHTA RGNGPLPVVS GYTKKDLLIW RELVARALTA
AGVSSTDILQ VELDPGLANW GRDYKDGAES VGAGVIPMTT LPPEKQLMIL KDYKTSVLVT
SASGAEQLVY HLFRANLNPN ELALKTLILV GDAPGDNVRG NLEEQLHVRA WLHHGLNEVP
GPALGFECEE RNGLHVSEDH FLIEVVNPDT GELVKAGEEG ELVLTTLTTR AYPLIRFRTG
DRVRLLHGAC PCGRTLRRVE WLPYRADDMM VIRGVKVYHK QIFHILTREL GFEPPLYRFM
AVKQQMMEYL EVSLGVNESI FSDEIKEMQK LSQKLSDELS LEIGLPVAIR LKEQGSFT