Gene Sfum_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1657 
Symbol 
ID4460062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2032774 
End bp2033808 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content52% 
IMG OID639702426 
ProductMg2+ transporter protein, CorA-like 
Protein accessionYP_845779 
Protein GI116749092 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.180392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATC AATTTGAGAT TTGCCAGGGG GGGCTTGTTC AGAGCGATTC GGCTGCGGCC 
AATATCCTGG TCTATGCCGC ACCGGGCGTA GCGGAGAAAG AGGAGCTGCT CAAGATACTG
CAGTTCGATG CGCATGACTT GGAATCGGCT CTCGATCCGG ACGAGATTTC GCGCGTGGAA
TTCAACCCGG AAGGTATTTT TATCATCTGG AAACGCCCGA ACCGAGCCTC GTTTGAGGAG
ATGTTGAAGT TTGAAGTGTC ATCGGTGGGG GTATTTCTTC AACCGGACCG AATGACCGTG
ATCGTTAACG AAGATGCACC TTTGTTTACT GCCGGGAAAG AATTCCGTGA TGTGACCTCT
CTTAACAATA TGCTCCTTCG ATTCTTGCTG CACACAACCC GGCATTACTT AGATCATCTC
AAAGTGATCA AGCAACTGAC GGGCGAATTG GAAAGGAAGC TAAGCCTTTC CATGGAAAAC
CGGTATCTGC TCCAGATGTT CGGTCTGAGT GAAAGCCTTA TTTACTATCT GAGTGCGCTT
GAATCGAATG CGGTCGTGCT GAAGAGGCTT CGAGCCAATG CGAACCGGAT CGGCTTCTCC
GAGGAAGAAC AGGAGACGAT GGACGACATC ATTATCGAAC ACGACCAGTG CCGCAAACAA
ACGGAGATCT ACTCATCGAT TTTGTCCGGC CTGATGGACG CCCGGGGGAA TGTCGTCAAC
AACAACATGA ACGTGCTGCT GAAAAACCTG ACGCTGATCA ACGTGGTCTT CCTGCCGCTG
AATCTCATCG CCAGTATCGG CGGGATGTCT GAATTCAGCG CGATGATGAA GGGAATGGAC
TGGCGGATTT CTTACTCGCT GTTCATGCTT GCCATGGCGG TGCTGGGATG GATCACCTGG
GCGTTCCTGG TACGAAAGAT CGAACGAGGG AATGGAAAGG CCCGTGCAGC AAGAGAGCTC
CAACCGCAAT TTGCCGGCGG CAGGACCTCT ATTGGCCTGT GCGTTGATCG CGGCGACTGC
GGTCCGCAAC GATGA
 
Protein sequence
MKNQFEICQG GLVQSDSAAA NILVYAAPGV AEKEELLKIL QFDAHDLESA LDPDEISRVE 
FNPEGIFIIW KRPNRASFEE MLKFEVSSVG VFLQPDRMTV IVNEDAPLFT AGKEFRDVTS
LNNMLLRFLL HTTRHYLDHL KVIKQLTGEL ERKLSLSMEN RYLLQMFGLS ESLIYYLSAL
ESNAVVLKRL RANANRIGFS EEEQETMDDI IIEHDQCRKQ TEIYSSILSG LMDARGNVVN
NNMNVLLKNL TLINVVFLPL NLIASIGGMS EFSAMMKGMD WRISYSLFML AMAVLGWITW
AFLVRKIERG NGKARAAREL QPQFAGGRTS IGLCVDRGDC GPQR