Gene Sfum_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1656 
Symbol 
ID4460061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2031762 
End bp2032526 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content59% 
IMG OID639702425 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_845778 
Protein GI116749091 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.171816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA CCTTTCTCGG GGTGGGGGAA GCCTGTGACG CAATATTGCC GAACACGTCG 
CTCTGGATCG AGACCGGAAC GGGGGGACGG CGGTGCTCCG TGATGCTGGA TTGCGGTTTT
ACCGTTCCGC CCCGATACTG GCTTCAAACC GAAAACCCCG ACGATCTGGA TGCGCTGTGG
GTTTCTCATT TCCACGGCGA TCATTTTTTC GGGACGCCCG CCTTGCTGCT AAGATTCTGG
GAAACGAGGC GCACCAAGCC GCTTGTTGTC ATCGGACAGC CCGGCATCGA ACAGCTCATC
CGGAGCTCCA TGGACCTCGC CTATCCAAAT TTCCTGCCGA AGCTGACCTA TCCGTTGGAG
TTTCATACCG CAATTCCGGG CGAAACGATG CACGCTGCCG GACTCGACTG GAATTTTGCG
GAATCGGGCC ATGGACAGCG CAACTTGAGC GTGCGGGTAG ACGACGGAAG CGAGGCGATA
TTTTACAGCG GAGACGGCCT GCCGTCCGTG GACACCCTGG AGCTGGCGAG AGGCTGCGCC
TTGGTGGTTC ACGAAGCGTT CCGCCTGGAC CAGCCCACGC CGGGGCACGG GACGGTGTCG
GAGTGCATCG GGTTTGCCCG GCAGGCCGGT GTCCGGCGGC TGGCACTCGT GCATTTTCAA
AGGGATGAAA GAAAAACGAA ATGGCCGGCC ATTCTGAATT TGGTGCAAAA AGCGCAAGAT
CTCGAAGCGA TCGTTCCGGA ACCAGGCGCC GTGATGGAAT TGTAG
 
Protein sequence
MKITFLGVGE ACDAILPNTS LWIETGTGGR RCSVMLDCGF TVPPRYWLQT ENPDDLDALW 
VSHFHGDHFF GTPALLLRFW ETRRTKPLVV IGQPGIEQLI RSSMDLAYPN FLPKLTYPLE
FHTAIPGETM HAAGLDWNFA ESGHGQRNLS VRVDDGSEAI FYSGDGLPSV DTLELARGCA
LVVHEAFRLD QPTPGHGTVS ECIGFARQAG VRRLALVHFQ RDERKTKWPA ILNLVQKAQD
LEAIVPEPGA VMEL