| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1622 |
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| Symbol | |
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| ID | 4460091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1982927 |
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| End bp | 1985851 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702391 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_845744 |
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| Protein GI | 116749057 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGAA CTTCGAGGAT TTTTCAACTC AGCCTGTTCC CGGGGCTTTC TTTGCTGCTT
CTTTTCGTCC TCGGAGCCTC TGCCGCCCGG CAGGGTGACC CTGCTGAACC GCCTGCCCGG
GCCAAGGTCC AGGCAACCGC CGCCTCGAAG GCGAAGCGGT TCTACGTGGG TGTGGCGTCG
TGCCGAAAGT GCCATGACGA CCCGAAAGGC AGGAATCAGT TCAACGTTTG GTATCTCCTG
CCCCACGCCA AGGGTTACGC CACTCTGGCC ATGCGGGAAT CAGCCCAAAT AGCGAAGCTT
TCGGGGATAA ACATCGATGT TCTGACCAGC CCCATCTGCC TTGGCTGTCA TTCCACCGCA
TCCGATGCCG AGAATTGGGA ACGGGACAAG GGTTTCCACC TGGAAGACGG GGTCCAATGC
GAGCGATGCC ATGGTCCGGG GAGCGAATAC AGCGATCCGG CCATCATGGC CGACAGGGAA
GCCGCAGTCA GGGCCGGCCT CCGGATCCCG GACAAAGACT ATTGCATGAA CTGCCACGAA
GAGAAGGGAT CACACCAGAG CGTCCTCAAG GTAAAGCCTT ACGTTTTTGA AACGGCGATC
GAGACGATCA GCCACAAAGG GAGGGGCGGA GCTGTTCCGG AGACATCGAA GCGTTCACAG
CCGTTGCTTG ACGGGCCCAA GTACGTCGGG GTCATGGTCT GCGCCCGGTG TCACAACAAA
TCCACAACCG GTTTTGCGTT CAGCAAATGG CGGCTTTCGT CTCACGCCGA CGCCTGTGTG
ACGCTTGGCA GCGACAAAGC GAGGCAGATA GCCTCCGGCG CAGGTGTGGA AGGCGATCCC
CGGCAGGCCC CGGCCTGTCT CAAGTGCCAT GTCACGGGGC AGGGAGAGCC GGAAGGGCCG
AGTCTCAAGA CCTTTGAACC GATGCGCGGC GTTCAGTGTG AAAGCTGTCA TGGACCCGGC
AGCGAATACG CTCGGGAAGA AGTGATGATC GACAAGGCCG CATCGAGGCG GGCAGGGCTC
AACGATGCGC CAGGGGAGAC TTGTTTGCGA TGCCACAACG GATTCCACGG CAAAACCTTG
GAATACGAGA GTATGTGGAA GGCAATATCG CATTCGAAAC CCGACGACGC GCAGAATCGG
CAGCAGGCCG TCGAATACAA GACCCCGTTC AACCTGGCCG TCACCCGAGA CGGCAGGCGG
TTGTTCGTTG CCTGCGAAGG CTCCGGCAGC CTTATCGCAG TCGACACGAA GAAGCGGGCG
GTCATCGCGG AGACGAAAGT GCAGAATCTG CCCCACGGGG TTTCGCTCTC GCCCGACGAG
GAGCGTGTGT TCGTGAGCAA TCGCGGCTCC GATACGGTAT CGGTTGTCGA TGCGCGTACA
TACAAGGTCG TTGCTGCCTT CTCCGTCGGG GACGAGCCCC ACGACCTCAT GAGCGATGTT
TCCGGCAGCA CCCTCTATGT GGCCAACGCG GGCTCGAACG ACATTTCGGT CGTCAGCCTG
CGCGAGGGGC GTGAAGTGAA ACGACTCTCC GCGGGGCGCG GGACCTGGGG CATGAGTCGC
AGTCCGGACA ATCGGCTCAT CTACGTCACG AACAACCTGT CTCACTTCGT GAAATTCCGG
GCCCCGTCAA GGTCCGAAGT GACCGTCATC GATACCGGGA CTGCTCGGGT CAGGAACCGC
ATCGTGATTC CCGAAGCCAA CCTGGTGCAG GGCATCGACT TTTCACCAGA CGGCGAGTTC
GCTCTCGTTA CGCTGCTGCG CACGAAGAAC CTGGTGCCCA TGGTGCGCGT GGTTCAGGGC
TGGGTCATCA CCAACGGAAT CGGAATCTTG TGGAAGGACG GTCGTGTGGA CCAGTTGCTT
CTCGACGAAT TCGACCATCA TTTTGCCGAT CCCACGGATG TGGCGATCAC GGCCAAAGGC
CGGTACGCCT ATGTCTCCGG CGGCGGGGTG AACGCCGTGG CCGCGATCGA CGTCGAACGA
ATGAAGGAAG TCCTCAATCG CGCATCCAGT GAAGAACGGG AGTCCGTCCT GCCCAATCAC
CTCGGTGTTC CAAACGATTA CATAGTCAAG CGGATCGAGG TGGGTCGTGG TCCGCGAGGC
CTCGTCGCAT CGCCCGACGG TCGATTTGTC TATGTGGCGG ACGCCCTGGA CGACGCCGTG
TCCATCATCG ATACGGCAAA GCAGGAACGT GTGGGCGTCA TTGATCTGGG CGGTCCAAAG
GAGGTTACGC TCGAGCGCAT GGGCGAGAGG ATTTTCCACA GTGCCGAAGC CACCTACGGC
TGCCAGTTCT CCTGTCATTC CTGCCACCCG GACGGCGGAA TCGACGGCAT CACCTACGAC
ATAGAACCGG ACGGCATCGG GATCAATCCG GTGGATAACC GCACCTTGCG GGGGATTCTG
GACACGGCGC CCTTCAAATG GACGGGGAAG AATCCTTCGC TGAGCCGGCA ATGCGGCCCT
CGGCTGGCGG TCTTCTTCAC CCGGGTTGAT CCTTTCACTC CCGACCAGGT CAAGGCACTC
GACCGCTACA TCTGTTCCAT TCCCAGGAAT CCCAACCGGT ATCGTTCGGA GGATAGACTC
ACTCCCGCCC AGCGCAGAGG CAAGGCCATA TTCGAGCGCA CCCACACGAA CACCGGTGAA
GAGATACCCG TGGCCAACCG CTGCGACACC TGCCATCCGG GGCCCTATTT CACCAACAGG
CGCATAGTGG ACGTGGGCAC CAGGTCGGAA CTCGATACCG GCGGAAAATT CGACGTCCCG
CAACTGAACA ATATCTATGA AAACGCACCT TTTCTTCACG ACGGACGTGC GGATACCCTG
GAAGAGATCT GGACGCGTTT CAACCCGGAA GATCGACACG GGGTGACCAA CGATATGACC
AAGGATCAGT TGAACGATCT GATCGAGTAT TTGAAGACCC TGTGA
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| Protein sequence | MSRTSRIFQL SLFPGLSLLL LFVLGASAAR QGDPAEPPAR AKVQATAASK AKRFYVGVAS
CRKCHDDPKG RNQFNVWYLL PHAKGYATLA MRESAQIAKL SGINIDVLTS PICLGCHSTA
SDAENWERDK GFHLEDGVQC ERCHGPGSEY SDPAIMADRE AAVRAGLRIP DKDYCMNCHE
EKGSHQSVLK VKPYVFETAI ETISHKGRGG AVPETSKRSQ PLLDGPKYVG VMVCARCHNK
STTGFAFSKW RLSSHADACV TLGSDKARQI ASGAGVEGDP RQAPACLKCH VTGQGEPEGP
SLKTFEPMRG VQCESCHGPG SEYAREEVMI DKAASRRAGL NDAPGETCLR CHNGFHGKTL
EYESMWKAIS HSKPDDAQNR QQAVEYKTPF NLAVTRDGRR LFVACEGSGS LIAVDTKKRA
VIAETKVQNL PHGVSLSPDE ERVFVSNRGS DTVSVVDART YKVVAAFSVG DEPHDLMSDV
SGSTLYVANA GSNDISVVSL REGREVKRLS AGRGTWGMSR SPDNRLIYVT NNLSHFVKFR
APSRSEVTVI DTGTARVRNR IVIPEANLVQ GIDFSPDGEF ALVTLLRTKN LVPMVRVVQG
WVITNGIGIL WKDGRVDQLL LDEFDHHFAD PTDVAITAKG RYAYVSGGGV NAVAAIDVER
MKEVLNRASS EERESVLPNH LGVPNDYIVK RIEVGRGPRG LVASPDGRFV YVADALDDAV
SIIDTAKQER VGVIDLGGPK EVTLERMGER IFHSAEATYG CQFSCHSCHP DGGIDGITYD
IEPDGIGINP VDNRTLRGIL DTAPFKWTGK NPSLSRQCGP RLAVFFTRVD PFTPDQVKAL
DRYICSIPRN PNRYRSEDRL TPAQRRGKAI FERTHTNTGE EIPVANRCDT CHPGPYFTNR
RIVDVGTRSE LDTGGKFDVP QLNNIYENAP FLHDGRADTL EEIWTRFNPE DRHGVTNDMT
KDQLNDLIEY LKTL
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