| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1619 |
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| Symbol | |
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| ID | 4460088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1979001 |
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| End bp | 1980227 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702388 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_845741 |
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| Protein GI | 116749054 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACATT GTTCGCGGGT CTTGCCGGTT CATTGCGACA GGCGAAAGCT CGGGAGTCGT
CTCTGCCGGG CAGTTCTCGC GGCGGCATGC CTTGTGCTGG CGGTTGGCGG CGTGTGCGCT
CAAGGCCCCG GCAGTTCAAA GCCTTACAGG GTCATGCTCG ATGACCCGCT GCAGTCTACC
TGCTACGGAG GACCGTCGGT AGATCCGGCA TTCGTACGTG AGATCGCCAT CGGCCTCTAT
TCACCGCCCG AATCGGCCGA TCCGGTGGGA CGAGCGATGG TCGAAGGGGC CGGCCTCGCC
GTCGAGGAGG CCAACGCCGG GGGAGGCTGC AACGGCGTTC CTTTCCGGCT GGTGAGGCGC
TGGGCTGAGA ATCCGTGGTC GGCCGGATCG AAGGAGATTG TCCGCCTGGC CTATGAGGAC
AATGTATCGG CGGTGATCGG ATTCTTGCAG GGAACCACCA ATATTGCCGA ACAAATTGCC
GCAAAAGCCT ACCTTCCCGT CGTGTCGCCC GTGTCGACGG ACTCGTCGCT CACCCATGCC
CGCATCCCCT GGATATTTCG ATTGCCGCCG GACATCCGTA CCCAGGCACA TTTGCTGGTG
AAGCGGGGCA TGGTCCCGTT GCGTCTCGGT CGCGTGGGGC TGGTGACTTC AACCGACCAT
GACGGCCGTA TGGCCGCAGA GGACCTCCGC CGGGAGATGG AAGGGCAGGG AGTGCCGCCC
GCTTTTCATT TGCCGATTGG TACAGACGTG AACGATCAAA GCAGGGTTGC AAGCCGCATC
AAGGCTTTTT CTCCCGACGG CCTGGTCCTT TGTCTACCCC CGAAAATCGC ACTGAAACTG
GCGGCAGCCC TCAGGGGAAC AAACGTGACC TGTTCCATCT TCGTCCCATG GATTCCGGGT
CTGAAGGCAA CGGACTTACA TGCGGTGTAT GAGGGGCCCG TCGTGACGGT CGAACCCTTC
GAGGAGTCGG CATCCACCAT CGCGTTCAGG GAAGCCTACC TGCAACGATT CGGCGCCGAT
CCGAGCCCCT CTGCGGCATA CGCTTACGAC GCAGCCAGAC TCATCGTCGC GGCGGCCCGA
AGTGGTGATC CGACACGCAG CGGTTTGCGC GCCGGGTTGG CCGCTTTGTC GGGATTCGAC
GGCGTTACGG GACCCATCCG ATGGGACAAC GGCGGTGGAA ACCAGGTCCA ACCTGTTCTT
CGTGTTTTTT CGAACGGGAT GCCCTGA
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| Protein sequence | MRHCSRVLPV HCDRRKLGSR LCRAVLAAAC LVLAVGGVCA QGPGSSKPYR VMLDDPLQST
CYGGPSVDPA FVREIAIGLY SPPESADPVG RAMVEGAGLA VEEANAGGGC NGVPFRLVRR
WAENPWSAGS KEIVRLAYED NVSAVIGFLQ GTTNIAEQIA AKAYLPVVSP VSTDSSLTHA
RIPWIFRLPP DIRTQAHLLV KRGMVPLRLG RVGLVTSTDH DGRMAAEDLR REMEGQGVPP
AFHLPIGTDV NDQSRVASRI KAFSPDGLVL CLPPKIALKL AAALRGTNVT CSIFVPWIPG
LKATDLHAVY EGPVVTVEPF EESASTIAFR EAYLQRFGAD PSPSAAYAYD AARLIVAAAR
SGDPTRSGLR AGLAALSGFD GVTGPIRWDN GGGNQVQPVL RVFSNGMP
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