| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1602 |
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| Symbol | |
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| ID | 4460102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1952538 |
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| End bp | 1955162 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702369 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_845724 |
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| Protein GI | 116749037 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCCA TGGATCAGAT CGTCATCAAA GGCGCCCGCG GGCACAACCT GAAAAACATC
GATCTGGAGC TTCCCAGAAA CCGGTTCGTG GTCATCACCG GCGTCAGCGG TTCGGGAAAA
TCCTCGCTGG CCTTCGACAC CCTTTTTTCC GAAGGCCGGC GCCGCTATGT CGAATCCCTC
TCCACCCATG CGCGGCAGAT GCTGCAGCGG CTCTCCGCTC CCCCCGTCGA TGAAATCCGC
GGACTGAGTC CCGCCATAGC CATCGAACAG AAAGGATTGC CGCGCAATCC AAGGTCCACG
GTCGGAACAC TCACCGAAAT CAACGACTAT CTGCGGCTCC TGTATGCCCG CCTCTCCATC
GCGCACTGTC CTTCCTGCGG ACATCCCGTC CGAGCCCACA CGGTGCCGCA AATGGTTCAG
GAGGTATTGG CCGCATGGCC TTCCGGCAGC AGGCTCCTGA TTGTAGCCCC CCTTGAACCC
GTCCCTGCAA AGCATCTCCC GAAAGTTTTG CAGAAGCTGA CAAGAGACGG CTTCGCCAGG
ATCAGGATGG ATGACGTCGT CTTCGAGCTG GATCCCTTGC CGCTTCTTCC CCGGCGCGCT
GAATTCCGCC TCGAAGTCGT CGTCGATCGC ATCGTGCTCG ACGAATCGAG GGCACGCAGG
TTGACCGACT CTTTCGAGGT TGCCGCCGGA ATCGGTCGCG GCATGACCGG CGCAGTGCGC
CTCGAGGGCG GCGAGATGCG CTTCAGCGAA GCTCACCGCT GCGTCGCCTG CGGATACGAT
GTGCCCAGGC CGACACCCAG CCTCTTTTCC TTTCACCATC CCCTGGGAAC CTGCCCGGAA
TGCCGCGGTC TGGGTTTTCT GGATCATACC GTTCCCGAGC CGGGCCGGCG GGTGAGGATT
CGCGGGCCGG CAACCGGAAC GGATGACGGG GACGCCGGAG TCGAGGAGGG GGATGGGGAG
TCCCATCCCG GAAGGACAAT CTGCCCGTCC TGCGGCGGAT CGAGGCTCAA TGGATCGGCA
CGGTCTTTTT TCCTGGGCGG CCTGGGCATC CACGAAGCGT GCGGGCTTCA GCTGCAGGCC
GTGTTGGACT GGCTCGCGGA CTTGAACCTC TCTTCCTCAC AGGCGCTGAT CGCGGATCGT
CCCCTGCGGG AAATCATCGG CCGCTTGAAC CACCTGCTCG AACTGGGACT GGCGTATCTC
ACCCTGGACC GCGCGGCCGA CACACTTTCC GGCGGAGAGG CTCAGCGTAT CCGTCTGGCG
CACCAGCTCA GTTCCTCGCT TTCCGGCGTG CTCTACGTGC TCGATGAACC CAGCATCGGT
CTTCACCCCC GGGATCACCG GAAACTGCTC GACATTCTCT TCCGCCTGCG CGACGCGGGC
AACAGCGTCA TCGTGGTCGA GCACGACCGG CAGACCATCC TCGAGGCCGA CCACGTGGTG
GACATGGGGC CCGGAGCCGG AGCCGGCGGC GGGGAGGTGG TCTTTTCCGG CACTGCCGCC
CAAATGCTCG AGCATCCCGA TTCCTTGACC GGGAAGTACC TCTCCGGCCG CAAGGTCATA
TCCATCCCGC CCAGACGGAA GCCTTTCGCT CGAGGCACAC TCCAACTGCG CGGGGCGCGT
GGGCACAACC TGAAAAACAT CGACGTCGAT TTCCCGCTGG GCTGCCTGAT CTGTGTCACG
GGGGTTTCGG GTTCGGGGAA AAGCACGCTT GTCCTGCACA CACTTTACAG GGCGCTCGCC
CGGCGACTTC ACGGCAGCCG AAGCCCTGTC GCCCCTTTCG ACACCCTCGG CAATGCCGAA
GCCGTCGGGA AAATCCTTCT CATCGATCAG TCACCGCTGG GCAAGACGCC AAGATCCACC
CCCGCCACCT ATTCCGGCCT TTTCGACCAC ATCCGCCAGG TATTCTCGCA AGTGCCTGAA
GCCCGCGCCC GAGGATACCG TCCGGCGCGG TTCTCCTTCA ATGCCAAGGG GGGCCGCTGT
GAAGCCTGCA AGGGAGAAGG CCTTCAGCGG ATCGAAATGT ACTTCCTGCC CGACGTCTAC
GTCACTTGCC CGGTCTGCGG CGGAACGCGC TACGGCAACG ACACCCTGGA CATCCTTTTC
AAGGGGCATT CCATCGCCTC CGTGCTCGAC ATGACCGTGC ACGAAGCGGT CGTTTTGTTT
GAGAACTTCA CCGCCATCCG CGCCAAGCTC GATACCCTCA TTGAAGTGGG CCTCGGATAC
CTTCGGCTCG GGCAGCCGGC CAACACTTTG TCGGGCGGTG AAGCACAACG CGTCAAACTG
GCCGCGGAAC TCGGCGTCAA GGGAATCGGA AGGGCGCTCT ACATCCTCGA CGAACCCACT
ACCGGCTTGC ATTTCGAAGA CATCGAGCGG CTGCTGCACG TGCTCCAGAG GCTGGTCGAC
CTCGGCCACA CGGTGATTCT TATCGAACAT CATCCCGACG TGGTCAAGAC AGCCGACTAC
GTGATCGATT TGGGCCCTGA AGGAGGAGAG CAAGGCGGGT ATCTCATCGG AGCCGGCAGC
CCGGAGGAGC TTTCCACGGT TGAATCTTCC TTTACCGGCC GTTACCTGAG GGAGGTTTTG
AAACGAACTT CCGTTCCGGA AGGTAAACTT GACGGGAGGG AATGA
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| Protein sequence | MAPMDQIVIK GARGHNLKNI DLELPRNRFV VITGVSGSGK SSLAFDTLFS EGRRRYVESL
STHARQMLQR LSAPPVDEIR GLSPAIAIEQ KGLPRNPRST VGTLTEINDY LRLLYARLSI
AHCPSCGHPV RAHTVPQMVQ EVLAAWPSGS RLLIVAPLEP VPAKHLPKVL QKLTRDGFAR
IRMDDVVFEL DPLPLLPRRA EFRLEVVVDR IVLDESRARR LTDSFEVAAG IGRGMTGAVR
LEGGEMRFSE AHRCVACGYD VPRPTPSLFS FHHPLGTCPE CRGLGFLDHT VPEPGRRVRI
RGPATGTDDG DAGVEEGDGE SHPGRTICPS CGGSRLNGSA RSFFLGGLGI HEACGLQLQA
VLDWLADLNL SSSQALIADR PLREIIGRLN HLLELGLAYL TLDRAADTLS GGEAQRIRLA
HQLSSSLSGV LYVLDEPSIG LHPRDHRKLL DILFRLRDAG NSVIVVEHDR QTILEADHVV
DMGPGAGAGG GEVVFSGTAA QMLEHPDSLT GKYLSGRKVI SIPPRRKPFA RGTLQLRGAR
GHNLKNIDVD FPLGCLICVT GVSGSGKSTL VLHTLYRALA RRLHGSRSPV APFDTLGNAE
AVGKILLIDQ SPLGKTPRST PATYSGLFDH IRQVFSQVPE ARARGYRPAR FSFNAKGGRC
EACKGEGLQR IEMYFLPDVY VTCPVCGGTR YGNDTLDILF KGHSIASVLD MTVHEAVVLF
ENFTAIRAKL DTLIEVGLGY LRLGQPANTL SGGEAQRVKL AAELGVKGIG RALYILDEPT
TGLHFEDIER LLHVLQRLVD LGHTVILIEH HPDVVKTADY VIDLGPEGGE QGGYLIGAGS
PEELSTVESS FTGRYLREVL KRTSVPEGKL DGRE
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