| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1554 |
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| Symbol | rpsJ |
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| ID | 4461099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1917025 |
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| End bp | 1917336 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639702321 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_845676 |
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| Protein GI | 116748989 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000633059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.961708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGACGA ATCAAAGAAT TCGCATCCGT TTGAAAGCTT ACGATCATAA ATTGCTCGAC
CAGTCGACGA GTGAAATCGT GATGACCGCC AAGAAGACGG GCGCGCGAGT GGCCGGACCC
ATTCCTCTTC CCACGAAGAT ACACAGGTAC ACGGTTTTGA GGTCCCCGCA CGTCGACAAG
AAATCGCGGG AGCAATTCGA GATTCGCGTC CACAAACGTC TGATCGATAT ACTGGAACCG
ACTCAACAAA CGGTCGATTC ATTGATGAAG TTGGATCTGT CCGCCGGGGT GGATGTGGAA
ATCAAGCTCT AG
|
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| Protein sequence | MMTNQRIRIR LKAYDHKLLD QSTSEIVMTA KKTGARVAGP IPLPTKIHRY TVLRSPHVDK
KSREQFEIRV HKRLIDILEP TQQTVDSLMK LDLSAGVDVE IKL
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