Gene Sfum_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1534 
Symbol 
ID4460619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1894602 
End bp1895726 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content60% 
IMG OID639702300 
Producthypothetical protein 
Protein accessionYP_845657 
Protein GI116748970 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTC CAACGACGAA CACCCGGCTT GCTTCACTCG ATGCCTTTCG AGGAGCCGTC 
ATTGCCGGGA TGATCCTCGT GAACTCACCC GGCAGGTGGG TCTACACCTA TTCGCAGCTC
AAACACGCCC AGTGGAACGG CTGGACTTTC GCGGACACGA TATTCCCGGC ATTTCTGTTT
GTCGTGGGCG TTTCCATGGT TTTCTCGTTT TCCCGCCGGA GAGAATGCGA AGAACCCGCC
TGGAGGCTGG TGCTGCAGGT CTTCAGACGA ACGTCGCTCA TCTTCCTCCT CGGACTCCTG
CTCAACGTGA TGCTCGACTT CCATGGCTCC AACCTGAGGA TCCCCGGGGT ACTCCAAAGA
ATCGCCGCCT GCTATTTCGT CGCGTCGCTG ATTGTGCTGG GAACCGGCTT CCGGGGCCAG
GCGATCTGGG CCTTGGGCCT TCTTGCCCTC TATTGGCTGC TGATGGAGTT CTACCCCGTG
CCCGGAATCG GCGCGGGGGT TCTCGAACCG GGAAGAAACT TCGCCTCCTA CGTCGATTCC
CTGCTTCTTG ACGGGCACAT GTGGTCGCAC TACCGAACCT GGGACCCGGA AGGAATCATC
AGCACGATCC CCGCCGTCTC CTCCACCCTT TTCGGAGTCC TCACGGGACA CTTCCTGAGA
TCGACGTTTT CCGCAAAAGC GAAGACCGCC GGGATGCTGG GTGCGGGGGC GGCGCTGCTG
GCGCTCGGCC GGTTCTGCAG TATCTGGCTC CCCATCAACA AGAACATCTG GACCAGTTCG
TACAGCATCT TCATGACCGG CCTCTCACTG GCCGGGCTGG CGGTGTTCTA TTGGCTCATC
GATGTGAAAG ACCGCAAACG CTGGGCGATC CCTTTCGAAA TCTTCGGCAC GAACGCCATC
ACGGCCTACA TGCTGTCCAT GTTCCTGTTG ATAGCCGCGC GCGGCATCGA CTGGACGTTT
TCCGACGGCT CGCAGGTCAA GATACGGAGA CTGTGCTACG ACTGGATACT CATCCAGGTG
GGGAATCCCA AGGCCGCGTC CCTGCTGTTC GGGGTCGGCC TCCTGTTGGT CACATTCCTG
CCCCTGTGGC TCATGTGGAG GAGGCGTTGG TTCCTGAAGG CCTGA
 
Protein sequence
MNSPTTNTRL ASLDAFRGAV IAGMILVNSP GRWVYTYSQL KHAQWNGWTF ADTIFPAFLF 
VVGVSMVFSF SRRRECEEPA WRLVLQVFRR TSLIFLLGLL LNVMLDFHGS NLRIPGVLQR
IAACYFVASL IVLGTGFRGQ AIWALGLLAL YWLLMEFYPV PGIGAGVLEP GRNFASYVDS
LLLDGHMWSH YRTWDPEGII STIPAVSSTL FGVLTGHFLR STFSAKAKTA GMLGAGAALL
ALGRFCSIWL PINKNIWTSS YSIFMTGLSL AGLAVFYWLI DVKDRKRWAI PFEIFGTNAI
TAYMLSMFLL IAARGIDWTF SDGSQVKIRR LCYDWILIQV GNPKAASLLF GVGLLLVTFL
PLWLMWRRRW FLKA