Gene Sfum_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1530 
Symbol 
ID4460615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1890422 
End bp1891102 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID639702296 
Producthydrolase 
Protein accessionYP_845653 
Protein GI116748966 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.49295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGG CGCGAATCAA AGTGTGCATA TTCGATGTCA ACGGCGTACT GATCGATTCC 
AACGCAGCCA ACGCTCAGGC CATGGCGCAG GCGTTCACCG AGGACCCGGA ACTGCAGGGC
CGCATCGTGG ACGTGTACCT GCAGCTCACC GGAATCGACC GTGGAAGCAA GATGCGCATC
GTTCAGGAGC GGGTGGTGGG CAGACCCTTC ACGGAGAACG AGTTCGAGCT CCGCTGGGAA
GGATTCAAAC GGCTCGGGCG CATCTCCATG CTCCGCGCTC CGCTGACGAC CGGGTGCCGC
GAGGTCCTCG CCGAACTCGG CAGGCTGAAG ATCACACGAG TCGCCCTTTC GAATACCCCG
CTGGAGGAAC TGAGAGAAAC CCTTGTAAAT CGCGGCCTGA ACGTTCTTCT GGATGAGATC
CGGGGAGGGG GGGACTGGCC GAAGTCGGAG ACGCTCGCCC GATTCCTCCG CGATTGCCGG
ATCGAGCCCC GCCACTGCCT CTTCCTGGGC GACGGCAAAG GCGACCTCGA TGCGGCCAGG
CGAAACGGCG TACCGTTTGC GGCAATCGAT CCCGGCACGG GAGAATTTCG GGGCGAGACT
GGATTCGACG GTCCATACCC CAACATCGCC GAGTGGTTGC GGAGCGTCTC GAGCCGGCTG
CCGCAAGACG AACCGGCCTG A
 
Protein sequence
MEPARIKVCI FDVNGVLIDS NAANAQAMAQ AFTEDPELQG RIVDVYLQLT GIDRGSKMRI 
VQERVVGRPF TENEFELRWE GFKRLGRISM LRAPLTTGCR EVLAELGRLK ITRVALSNTP
LEELRETLVN RGLNVLLDEI RGGGDWPKSE TLARFLRDCR IEPRHCLFLG DGKGDLDAAR
RNGVPFAAID PGTGEFRGET GFDGPYPNIA EWLRSVSSRL PQDEPA