Gene Sfum_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1528 
Symbol 
ID4460613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1887786 
End bp1888175 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content54% 
IMG OID639702294 
Productcache type 2 domain-containing protein 
Protein accessionYP_845651 
Protein GI116748964 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAA GGCGAAGAGA CGCGATGGAT TGGGTGGACA GGGCGATCTC GTTTTACAAA 
TCCGCAGGCC GGGAGATCGC CCTGGCCGAA TACATGAACC CCCGGGGACA GTTTGTCGAA
GATGAAATGT ACGTCTTTGT GCTGGATTCC GCCGGCACGA TGCTTGCCCA CGGGGTCAAC
GAAAAATTCG TGGGCAAGGA TTTCATCAAC CTCAAGGACT CCGACGACAA GCCGTTCATC
CGGGAAATCG TCGATATTGC CAACTCCCAG GGCAGCGGGT GGGTGCAATA CAGGTGGTAC
CATCCCACCA GCCGAAAAGT GGTTCCCAAA GTGGTCTATT TTGACAAAAT CGACGACATG
ATCTTTTGCA GCGGTGTCTA CGAGGAATAG
 
Protein sequence
MARRRRDAMD WVDRAISFYK SAGREIALAE YMNPRGQFVE DEMYVFVLDS AGTMLAHGVN 
EKFVGKDFIN LKDSDDKPFI REIVDIANSQ GSGWVQYRWY HPTSRKVVPK VVYFDKIDDM
IFCSGVYEE