Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1484 |
Symbol | |
ID | 4461454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1840267 |
End bp | 1841007 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639702251 |
Product | Sel1 domain-containing protein |
Protein accession | YP_845608 |
Protein GI | 116748921 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.743367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.990393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCAA ATCCGCAAAC CTTCAGTGCA AACCCCATGC TGAACAGGGT GAGGGCTGCT TTTGCTCTTG CGCTGTGGCT GCTGCTTCTT GCGGTCATAC CGGTCCATGC CGGCATGAAG TCCGGCATGG CGGCCTACAG GCGGGGCGAC TACGGGACCG CTCTCAGGGA GTTTCGGGCC GGGGCCGCGC GCGGGAACAC GGATGCCCAG AAGATGCTCG CCGCCATGTA CGAAACGGGT ACTGGGGTTA CGCGCGATTA CGGCGAAGCG TTCAAGTGGT ACTCCGCGGC CGCTCGAAGC GGCGACAGTT CCGCGCAGTT CATGGTGGCG CAAATGTATT ACGAGGGCAG GGGCGGGCCC AGGGACCTCT CCGAAGCGGT GACGTGGTAC CGCAAGGCCG CCGAGGGCGG GTTCCCCGAA GCGCAGTACA ACCTCGCCCT CTTTCATGAA ATAGGCCGGG GAACGCAGCG GGACATGAAC GAGGCCTCCA GGTGGTACCG CAAAGCGGCG GAAAAAGGCC TGCCGCAGGC GCAGGCCCGC CTCGGCCTCA TGTATGTCAA GGGGGAAGGC GTCCTGCAGG ACTACGTCCA GGCCCACATG TGGCTGAACC TTGCGGCTTC GAACGGCGAG GAAGGTGCCC GTAACGCCCT GGAAGCCCTC AGCGCCAAAA TGACTTCGGA TCAGGTGGCC AAGGCTCAGG AAATGGCACG AAAATGGCAT GCGAAAAAGA GGGGGAGGTG A
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Protein sequence | MKSNPQTFSA NPMLNRVRAA FALALWLLLL AVIPVHAGMK SGMAAYRRGD YGTALREFRA GAARGNTDAQ KMLAAMYETG TGVTRDYGEA FKWYSAAARS GDSSAQFMVA QMYYEGRGGP RDLSEAVTWY RKAAEGGFPE AQYNLALFHE IGRGTQRDMN EASRWYRKAA EKGLPQAQAR LGLMYVKGEG VLQDYVQAHM WLNLAASNGE EGARNALEAL SAKMTSDQVA KAQEMARKWH AKKRGR
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