| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1460 |
|---|
| Symbol | |
|---|
| ID | 4461516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1809447 |
|---|
| End bp | 1810739 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639702228 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_845585 |
|---|
| Protein GI | 116748898 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00261039 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCGC GCAAGCGGGT GTCGAGTCTC CGGACGGGAA GTCGAATCAT GATCATCGCC
GCGGTCTTTG TTCTCCTGGT TTTCCTGTAC AGCCTGGCGT CCAGGAGGCT CGAGCATACC
ATCGTCACGG CGCCCATCGT GTTCACTGCC GCGGGAATGC TGCTCGTCTC GACACTTCCC
GTGCTGAATG AGCTGGAAGC GGACCGGAAC GCGCTTCTCC TGCTTGCCGA GGTCGGCCTG
GTTTTGACGC TCTTCTCGGA TGCCACCCGC ATCAGTCCGC GGGTCCTGAA GGAGAACGAG
AGGCTGCCGG TCAGGCTGCT GAGTGCGGGC ATGCTGCTGA GCATCCTGCT CGGGGCGGCG
GCGGCGACGG TGGTGTTTCC CGGGCTCTCG ATCTGGGAGG TGGGCGTCCT CGCGGCGATT
CTCGCCCCCA CCGACGCGGG ACTGGGCGAA GTCATCGTGA ACAGCCCGCG GGTGCCGGTG
CGCATCCGCC AGGCGCTGAG CGTCGAGGCG GGTCTGAACG ACGGGTTGTC CGTCCCGTTC
CTCATGTTCT TCATCGCCCT GGCAAGCGCG GGCACGACCG GGACGGGCGG GACATTCATG
CGGTACGTGG TGGAACAGAT CGGCTTCGGC ACCTTGGTCG GCGTCGGCGT GGGGCTCGCG
GGCGGCCGGC TCCTGGGCCT CGCCGAGGAC AAGGGCTGGA TGGCGGGGTC GCTGCGGCAA
TTGGGACTGG TCGCCCTGCC CCTCCTGTGC GTCATGGGAT CCAAGCCCGT CGGGGCGAGC
ATGTTCATCG CCGCCTATGT CGCCGGGCTT GCCGTCCAGA TCGGGTTCAA GAGGGCCGGG
GAGGAGAGTG TCGAGTTCAC TGAGGGGTGG GGACGGCTCC TCGACTTCTT CGTGTTCTTC
TTTTTCGGCA TGCTGGTTGC CCGGGCGTTT GGCCGGTTCA GCCCGGCCTG CCTGGTGTAC
GGCGTCATCA GCCTGACGGC GGTGAGGATG CTCCCGGTTG CGGTCGCACT GGTGGGAACT
CGTCTCAGCG CAGCGACGGT GCTTTTCATG GGATGGTTCG GACCGCGCGG GCTCGCTTCC
ATCGTGCTCG GGCTGGTGTA CCTGGAGGAG GAGGCCCACC TGCCGGGGGA AACCACGATC
ACCCTCGCGG TGATGGCGAC GGTCCTGCTG AGCATCTTCG CCCACGGCGT AAGCTCCCTG
CCGGGGATCG GCCTCTACGC GAAGAAGATC GCCGCGATGG ACGCCTCCGC ACCCGAACAT
CTGAAGATTG CCGATTCCGA GCGGCTCTCC TGA
|
|---|
| Protein sequence | MQPRKRVSSL RTGSRIMIIA AVFVLLVFLY SLASRRLEHT IVTAPIVFTA AGMLLVSTLP
VLNELEADRN ALLLLAEVGL VLTLFSDATR ISPRVLKENE RLPVRLLSAG MLLSILLGAA
AATVVFPGLS IWEVGVLAAI LAPTDAGLGE VIVNSPRVPV RIRQALSVEA GLNDGLSVPF
LMFFIALASA GTTGTGGTFM RYVVEQIGFG TLVGVGVGLA GGRLLGLAED KGWMAGSLRQ
LGLVALPLLC VMGSKPVGAS MFIAAYVAGL AVQIGFKRAG EESVEFTEGW GRLLDFFVFF
FFGMLVARAF GRFSPACLVY GVISLTAVRM LPVAVALVGT RLSAATVLFM GWFGPRGLAS
IVLGLVYLEE EAHLPGETTI TLAVMATVLL SIFAHGVSSL PGIGLYAKKI AAMDASAPEH
LKIADSERLS
|
|---|
| |