| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1438 |
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| Symbol | |
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| ID | 4460490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1782620 |
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| End bp | 1785853 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639702207 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_845564 |
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| Protein GI | 116748877 |
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| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
[COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.977948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0058487 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAGA AATCGTGTCC ATTCTGTTCT CCCGATGATC ATCGCGTGTT CTACGAGGGC
AAGCTGGTAT TTGCACTGTG GGATGGCTTC CCGGTTGCTC CGGGGCATGC GCTCCTCGTT
CCCAAACGGC ATGTGGCAAC CTGGTTCGAC GCAACCCCTG AAGAGCGGGA GGAACTCCTG
GCTGCTACCG AGGTGGTTCG AGACCACATC CTCTCCCACT TCGAGCCGGC TGGCTTCAAC
CTGGGAATCA ATATCGGCAC GGCAGCCGGT CAAACCGTTT TCCATCTTCA CCTGCATGTG
ATCCCAAGAT ACCACGGCGA CGTTGAGGAC CCCACCGGGG GTGTTCGCAA TGTCATCCCG
GCAAAGGCAA ACTACCTGAA AAGACCCGTC GTGGAGATGG ATGCCATTGC GAAGAGTGCT
CACCGGGGGA TAACCGGCCC GTTTCTCGAC TTGGGTCGAT CAGAGCATTT GGTTTCTGGT
GGAGATGACC CATTGCTGCC TCATCTCCAG ACCCACCTCG ATGTCTCCGA ACGTGCGGAT
ATGGCCGTAG CTTTCATTCT CGAAAGCGGC ATAGACCTTC TCGAGGAACA CCTGCAGTCG
CTTCTGGATC GCGGGGGGCG AGTTCGGCTT CTTACCGGGG ACTACCTGGG AATCACCGAC
CCCATCGCGT TGTCCCGGCT CCTGGATCTG TGCGAAGGGG CTACAGGCCA ATTCGAACTC
CGGGTCTTCG AAAGTAGGGG TGTCAGCTTT CACCCCAAAG CCTATATTTT TTACATCGAC
ACTGTACCAG GGGGTGGCGT TGCATATGTT GGGAGCTCCA ACCTGAGCGG GCAGGCGCTT
GCGGAGGGTA TTGAATGGAA CTACCGCATA GTCCCTGCCG AAAGTCACAA AGGATTCCGG
GCGGTCACCG CCGCCTTCGA AACACTGTTT TGCCACGCAC GAACCAGGCC CGTCGACCAT
GTGTGGATCC GACAATACCA GGAATCGCGA AGGCCGCCCT GCATCAACGT GCCGCCCTCG
AACCAGGGCG AGGTCATTTT GGAAGAGGCC CAGAGGAACT GGGGAAGGCT CCCCGTTTCG
GTGCCGGCTG AAATTGTCCC CGAGGATGCC AAACCTTCGC CTGAACCCCA CAGAATTCAA
AGGGAGGCTC TCGAAGCGCT GGCGAGGACC CGTGCCGAAG GCAACCAGGC CGGGCTCGTG
GTCCTGGCGA CTGGCCTTGG GAAAACGTGG CTCGCAGCCT TCGACAGCGT TCGGTTTGGT
GCCGGGAAAG TGTTGTTTGT TGCCCATCGG GAGGAAATCC TTCGGCAGGC GCTGAAGACG
TTCCGCCGGA TTCGACCGTT TGCCGCCCTT GGGCTTTACA ACGGCACGGA AAAGCTGCCT
GGCGCGGATG TGCTTTTCGC CTCGATCCAG ACGTTGGGGC GCACCAATCA TCTCCGGTCT
TTTGACCGTA ATCTGTTCGA CTACGTTGTG ATCGACGAAT TCCACCATGC CTCTGCCCGG
AGCTATCAAA AGCTGATCGA CCACTTTCAG CCGGCTTTCC TTCTTGGGCT TACCGCAACG
CCGGAAAGGA CTGACGGCGG GGACCTCCTG GCGCTCTGCG CAGAGAATCT CGTATACCGC
TGCGATCTTG TTGAGGGAAT CCGCGACGGG CTCCTCTGCC CTTTTCGGTA CTTCGGTGTC
CCGGATGAAG TGGACTACAG CAACATTCCG TGGCGTAGCG GTCGCTTTAA CGAGGAAGCT
CTGACCCGGG CCGTGGCCAC CAAAAGGCGT GCCGTGAACG CCCTCGAGCA GTACCGGAGC
CGTGCCGGCA GGCGCACCCT CGCCTTCTGC TGCTCCCAGC GTCACGCCGA TTTCATGGCG
GATTATTTCA CCAATCAGGG GGTTCGGGCC GCTTCCGTTC ACTCCGGACC GCAGACGGCG
CCGAGAGGAG GTACCCTCAA GCGCCTTACC GACGGTGAAC TCGATGTGAT ATTCGCTGTC
GACATGTTCA ATGAGGGTGT CGACCTCCCT AATGTGGACA CCGTCATGAT GCTCCGGCCA
ACGGAATCTC GAATCCTGTG GCTCCAGCAG TTCGGTCGCG GGCTTCGAGT TGCCGAGGGT
AAGGACTACC TCCGTGTCAT CGACTACATC GGCAATCACC GATCCTTTCT GCTCAAGCCC
CGGACGCTGC TGGGTCTTGG GAGGGGTGAC AATGAACTTT CGATGGCGCT GGAGGCAGTC
CAAAATGGAA CATTCGATCT TCCACCGGGA TGCGAGGTCA CCTATGAACT GGAAGCCGTA
GACGTCCTGC GGGCGCTCAT CAAGATGCCG CCGGCGCACG AAGCTCTGCG ATTCTGGTAT
GAGGACTTTA AAGAGAACAA CGACAGGCGG CCGACAGCTG TCGAGGCCTT TCACGAAGGC
TACAACCCCC GCTCTGCCAG GAAGAACTAT GGCTCTTGGT TTCGGTTTCT CGCTGCAATG
GGCGATCTTT CGGCAGACGA ACGCAATGTG TTGGAGAATT CTCGGGCAGG AGACTTCCTC
GATATCCTGG AAACCACCCC CATGTCCAGG AGCTTCAAGA TGCTCACGCT CATGGCCATG
TTGAACGAGG GGCAGTTGCC CGGGCAAATC AAGGTTGAAA GGCTTGTGGA AGGCTTCGCA
CAGCTGGCCC TTCGCTCGGC GACACTCAGA ACTGATGTCG GAGTGGACCT CCAGGACCGA
GCAGCCCTTC GCCGATACCT GGAGAGGAAT CCCATCGAGG CATGGACCGG AGGGAGGGGC
ACCAAGCGTA AGTCTTTCTT TTCCTACCGT GACGGAGTTT TCGGGGCCAC TTTTACGTTA
GAGGATGCTA TTCGCGCCGC GTTTCATGAA CTTGCACGGG AAATCATAGA CTGGAGGCTG
GCCGAATACC TCCAGCGACC TTCTCTGAGC AACCCCGTGA CGAGCGATAT CCTATGCAGG
GTCAGTCACG CAAGTGGGCG GCCGATTCTG TTTCTTCCAG ACAGAAAGAT CCATCCACGC
ATTCCGCTCG GATGGACAGA AGTGCTTGTG GAAGGGGAGC CTTGTGAAGC CAACTTTGTC
AAGGTTGCGG TCAATGTGTT ACGTCGAAGA GACTCGGCAA AAAACGTCCT TTCAGAGATA
CTGAGGCGAT GGTTTGGTTC CGACGCTGGT CGCCCCGGCA CCAATTTTCA AGTCGTGTTC
CGAGAGTCGG ATGGAAGCCT GATTCTTGAA CCCATCGAGT CGGAGCGCTT TTGA
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| Protein sequence | MTEKSCPFCS PDDHRVFYEG KLVFALWDGF PVAPGHALLV PKRHVATWFD ATPEEREELL
AATEVVRDHI LSHFEPAGFN LGINIGTAAG QTVFHLHLHV IPRYHGDVED PTGGVRNVIP
AKANYLKRPV VEMDAIAKSA HRGITGPFLD LGRSEHLVSG GDDPLLPHLQ THLDVSERAD
MAVAFILESG IDLLEEHLQS LLDRGGRVRL LTGDYLGITD PIALSRLLDL CEGATGQFEL
RVFESRGVSF HPKAYIFYID TVPGGGVAYV GSSNLSGQAL AEGIEWNYRI VPAESHKGFR
AVTAAFETLF CHARTRPVDH VWIRQYQESR RPPCINVPPS NQGEVILEEA QRNWGRLPVS
VPAEIVPEDA KPSPEPHRIQ REALEALART RAEGNQAGLV VLATGLGKTW LAAFDSVRFG
AGKVLFVAHR EEILRQALKT FRRIRPFAAL GLYNGTEKLP GADVLFASIQ TLGRTNHLRS
FDRNLFDYVV IDEFHHASAR SYQKLIDHFQ PAFLLGLTAT PERTDGGDLL ALCAENLVYR
CDLVEGIRDG LLCPFRYFGV PDEVDYSNIP WRSGRFNEEA LTRAVATKRR AVNALEQYRS
RAGRRTLAFC CSQRHADFMA DYFTNQGVRA ASVHSGPQTA PRGGTLKRLT DGELDVIFAV
DMFNEGVDLP NVDTVMMLRP TESRILWLQQ FGRGLRVAEG KDYLRVIDYI GNHRSFLLKP
RTLLGLGRGD NELSMALEAV QNGTFDLPPG CEVTYELEAV DVLRALIKMP PAHEALRFWY
EDFKENNDRR PTAVEAFHEG YNPRSARKNY GSWFRFLAAM GDLSADERNV LENSRAGDFL
DILETTPMSR SFKMLTLMAM LNEGQLPGQI KVERLVEGFA QLALRSATLR TDVGVDLQDR
AALRRYLERN PIEAWTGGRG TKRKSFFSYR DGVFGATFTL EDAIRAAFHE LAREIIDWRL
AEYLQRPSLS NPVTSDILCR VSHASGRPIL FLPDRKIHPR IPLGWTEVLV EGEPCEANFV
KVAVNVLRRR DSAKNVLSEI LRRWFGSDAG RPGTNFQVVF RESDGSLILE PIESERF
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