Gene Sfum_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1422 
Symbol 
ID4461358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1763347 
End bp1763874 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content58% 
IMG OID639702190 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_845548 
Protein GI116748861 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.351184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.290854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGAACT ACCGACTGGT CGAACGCATT GATCCCCACG GGGTGACGAA GCTCGTGAGT 
GAACTGGCCG ATCGCATCAA TCGGGACTAT GAGGGACGGA GCCTGCTGGT CATCGGCATC
CTCAAAGGGT CTTTCATCTT CATGGCCGAC CTGGTGCGAA GGTTATCCCT TCCCGTGAAG
CTGGATTTCG TGCGGCTCGC GAGTTACGGA GACAAAGCCG AGTCGAGCGG GCGGGTGCAG
ATCACCAAGC GTATCGAACT GCCGGTCCAG GGACATCACG TCCTGGTGGT GGAAGACATC
ATCGACACGG GCGTCACTCT GAAGTGGTTT CTGGAACATC TCCGCGAACA CCGGCCGGAG
TCGGTGAGGG TGTGCGCACT GATCGACAAG CGTGAACGGC GCGAGGTTGA AGTCCCATTG
GACTACGTGG GCATTTCCGT CGAAAAGGGC TTTCTCGTCG GTTATGGTCT GGATTTCTCG
GAGAAGCACC GGAACCTCCC CGGCATTTTC GAGGTGTGTT TCGAATAG
 
Protein sequence
MENYRLVERI DPHGVTKLVS ELADRINRDY EGRSLLVIGI LKGSFIFMAD LVRRLSLPVK 
LDFVRLASYG DKAESSGRVQ ITKRIELPVQ GHHVLVVEDI IDTGVTLKWF LEHLREHRPE
SVRVCALIDK RERREVEVPL DYVGISVEKG FLVGYGLDFS EKHRNLPGIF EVCFE