Gene Sfum_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1399 
Symbol 
ID4461594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1737815 
End bp1738897 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID639702167 
Productmajor facilitator transporter 
Protein accessionYP_845525 
Protein GI116748838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.41856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.33149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTGGGGC TGGCCCAGTT CCTCCCCATG GTGATCCTGA CTCTCGCCGC GGGGCACATC 
GCAGATCGCC GTGACCGGCG CTCCATCGTA CGAACCTGCC AGGTCATCGA GGGATGTGCC
GTCGCAACGC TCGCCCTGGG CAGCCACGCA GGCTGGTTGC AGGTCGCGGG AATCTTTGTT
GCGGTGGCTT TCGTGGGGGC GGCCCGAAGC TTCGAGAACC CGACCATGGC CGCGCTGCTG
CCGGGGCTCG TCCCGGCTTC GCTGCTTCCC CGGGCCGCGG CGCTTTCGAG CTCGGCGATG
CAGACCGCGT TCATCGTGGG CCCGGCCCTC GGAGGGCTCC TCTACGCGGC AGGACCGACG
GCGCCTTACG CTTGCGCCGC CTCCCTCTTC CTGCTGGCGG GCGTGCTGTC CACGCTGATC
CGAACCTCGC GCTCACCGGC GTCCCCCTCG GAGTCTCGAG GCTTCAGGTC GGTCTTCACG
GGCATCGCCT TCATCCGCAA CCAGCGTGCC GTCCTGGGCG CCATCTCCCT CGACCTTTTC
GCCGTCTTGC TCGGCGGCGC CACGGCGCTG CTGCCGATCT ACGCCCGGGA CATCCTCCAC
ACCGGCCCCT GGGGCCTCGG GATGCTACGT TCCGCCCCGG CGGCCGGCGC CCTCGTGATG
TCCGTCATCC TGGCCCGCCG CCCGGTCGGA CGCCGTGTGG GCCAAACCAT GTTCACGGCG
GTCATCGTTT TCGGCGCGGC CACAGTCGTC TTCGCGGTGT CTTCCTCCAT GGTCCTGTCG
CTCGCCGCCC TCTGCGTGCT GGGCGCCGCC GACGTGTTCA GCGTCGTGAT CCGGCTGACC
CTCGTCCAGC TCGCCACACC CGATCACATG CGCGGGCGGG TGAGTGCGGT GAACGCCCTT
TTCATAGGAA CCTCGAACCA ACTCGGGGAA TTCGAGTCGG GCGTCACCGC CGCACTTTTC
GGCACAATTC CGGCCGTGTT GATCGGGGGC GTGGGAACCA TCCTCATCGC ACTCCTCTGG
ATGCGGCTCT TCCCCGAGAT CCGCAGGATC GACACCTTCG AGAGCATCAG GGCTCCCTCA
TGA
 
Protein sequence
MVGLAQFLPM VILTLAAGHI ADRRDRRSIV RTCQVIEGCA VATLALGSHA GWLQVAGIFV 
AVAFVGAARS FENPTMAALL PGLVPASLLP RAAALSSSAM QTAFIVGPAL GGLLYAAGPT
APYACAASLF LLAGVLSTLI RTSRSPASPS ESRGFRSVFT GIAFIRNQRA VLGAISLDLF
AVLLGGATAL LPIYARDILH TGPWGLGMLR SAPAAGALVM SVILARRPVG RRVGQTMFTA
VIVFGAATVV FAVSSSMVLS LAALCVLGAA DVFSVVIRLT LVQLATPDHM RGRVSAVNAL
FIGTSNQLGE FESGVTAALF GTIPAVLIGG VGTILIALLW MRLFPEIRRI DTFESIRAPS