| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1330 |
|---|
| Symbol | |
|---|
| ID | 4460361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1649918 |
|---|
| End bp | 1650916 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639702098 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_845456 |
|---|
| Protein GI | 116748769 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2006] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.955683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.017184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGGG ACTCTGATGA AAAGGAGCTG AACCGACGGG ATTTCCTCGT CCGGTCGGCC
AGGGCGGGTG GTTTCATCGC CGCCGCCGGG CTCCTGGGCT ACCGTCTCCA CGATGACACG
GGCGCTCGCG GATTGTCGTC GGACGAGGAG AGACAGGCCG TTCTGGCGGA CTATTCAGTG
CCCGGAACGA GTCGGAAGAT GAGCATCGTT ACGGGGCAGG ACCGGGTGAC GTCGGTCCGG
CTCGGCCTGG AGGCGATGGG TGGAATCGAG TCTTTCATCA AGCGCGGCGA CAAGGTGCTC
ATCAAGGTGA ACGCCGCTTT CGCCACCGCT CCCGCGCTGT CGGCGACGAC CGATCCCCGG
CTGCTGTCCG AAGTGGTGCG GCTGTGTCTG AAGGCCGGGG CTTCCGAGGT GGCGGTCACC
GACAATCCCA TCAACGATCC GCAGAGCTGC TTCGCCCTGA CCGGCATCGG GGAGGCCGCC
CGTTCCTCGG GGGCGAAGGT GATCTATCCG AAGCAAACCT TCTTCAGACC CGTCACCTTG
CCGGGCGGCA ACCTGATCAG GAAATGGCCG GTGCTTGTCA CCCCTTTCGA GGGTGTCGGC
AAAGTGATCG GGATGGCACC CGTCAAGGAC CATCACCGCA GCGGTGCATC CATGACCATG
AAAAACTGGT ACGGCCTGTT CGGCGGTCGG CGCAACATTT TTCACCAGAA CATCCATGAG
TTCATCATGG AGCTTGCCAT GCTGGTGAAA CCCACGCTCG TCATCCTGGA CGGCATCACC
GCCATGATGA CCAACGGTCC GACCGGCGGG TCCCTGGCGG ATCTGAAGCA GACGAACACC
CTGGTTGTCG GCACGGACCA GGTGGCCGTC GACGCGTTCG GAGCCACGCT GCTCGGCAAG
TCGGTGCACG ATCTTCCCTA CATCATGAAG GCCGAGGCTG CCGGAGCGGG CACAGCGGAC
TTCGAGTCAC TCGGACCGGC GCGCGTCACG GCCGGCTAA
|
|---|
| Protein sequence | MKRDSDEKEL NRRDFLVRSA RAGGFIAAAG LLGYRLHDDT GARGLSSDEE RQAVLADYSV
PGTSRKMSIV TGQDRVTSVR LGLEAMGGIE SFIKRGDKVL IKVNAAFATA PALSATTDPR
LLSEVVRLCL KAGASEVAVT DNPINDPQSC FALTGIGEAA RSSGAKVIYP KQTFFRPVTL
PGGNLIRKWP VLVTPFEGVG KVIGMAPVKD HHRSGASMTM KNWYGLFGGR RNIFHQNIHE
FIMELAMLVK PTLVILDGIT AMMTNGPTGG SLADLKQTNT LVVGTDQVAV DAFGATLLGK
SVHDLPYIMK AEAAGAGTAD FESLGPARVT AG
|
|---|
| |