| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1268 |
|---|
| Symbol | |
|---|
| ID | 4460695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1566961 |
|---|
| End bp | 1567407 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639702037 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_845395 |
|---|
| Protein GI | 116748708 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.972795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.261941 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCA AGCTTGCTGA AATGAAGCGA CGAATGGACG CGCTTTATGC GGAGAGCTTC
AAGCCTGAGA ATGAGCAATC TGCGGATGTG GAAACCGCTG CCGTGGATTG GGAGCCGTCG
GCGGACATTA CGGAACGGGA AGACGCGGTC CGATTTTTCA TCGACCTGCC CGGAGTGCTC
GAGTCGGAGC TCACGGTTGA AGTTGCCGAT AACAGGCTGG TGGTAAGGGG AAAGCGGGAA
ATTCCGATTG AGGACGCGCC GGCATCAGCC TGCCGGTGTC ATCGGGAGCG GCCTTATGGG
TCTTTCCGCA GGGTGTTTGC CATTCCCGGC GATTGCCTCA CCGAATCCAT CGGCGCCGAG
CTGAAAGCCG GGGTCTTGTC CATCGAGATC CCCAGGCAGG CCCCGCACCG CGGCTCCGCT
CACAAGGTTG AAGTTCGTTC GGAGTGA
|
|---|
| Protein sequence | MLSKLAEMKR RMDALYAESF KPENEQSADV ETAAVDWEPS ADITEREDAV RFFIDLPGVL
ESELTVEVAD NRLVVRGKRE IPIEDAPASA CRCHRERPYG SFRRVFAIPG DCLTESIGAE
LKAGVLSIEI PRQAPHRGSA HKVEVRSE
|
|---|
| |