| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1267 |
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| Symbol | |
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| ID | 4460694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1564776 |
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| End bp | 1566521 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702036 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_845394 |
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| Protein GI | 116748707 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.290854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTATT CGAAATACTT TATCCATACG CTGTTCGAAG TCCCCAAGGA AGCGGAGACC
CCATCGCATA TCCTGCTTCT GCGCGGCTGC TACATTCACC CCGTGGCGGC GGGAGTCTAT
TCATTGCTGC CCCTGGGGCA CCGGGTCGCC GAGAAGATAA AGGCCATTCT GCGTGAAGAA
CTGAACGCCA TCGAGGGGCT TGAGGTCACC ATGCCGGTTC TCAACCCTGC CGAGCTTTGG
AAGAAATCGT CACGGTATTA CGATATCGGC CAGGAGCTAT TCCGGATCAA AGACCGCAAA
GACAGGGAAT TCGTTCTGGC CATGACTCAC GAGGAAGTGA TCACCGATAT TGCGAGGCAG
TTTCTGCGCT CATACCGTCA CCTGCCCGTG ATGCTCTACC AGATCCAGAC GAAAATCCGC
GATGAGGCGC GTCCGAGGGC CGGGTTGCTC CGGGTTCGGG AATTCTTCAT GAACGACGCC
TACAGCTTTC ATCCCGATTT TGCCGATCTG GACGCCTACT ATCCGAGGAT TTTCAACGCC
TACCTGAGGA TATTCACCCG GTGCGGGCTG ACGACCGTGC CCATCGAGGC CGATTCGGGC
ATCATGGGCG GAACGGGTTC GCATGAATTC ATGCTCGAAT CCCCCAACGG CGAGGACCGG
TTCGTCGTGT GCACGCAGTG CGACTATCGG GCCAACACCG AAAAAGCGCA GGGCCTGATT
CCCCCGGTGA AGTATTCGGG CGATGCTCCG CCCCCGATGG AAGCGGTTCC CACGCCGGGG
ATAAAAACCA TCGCGGACCT GATGCGCTTT TTCGACTGTC CCGAAGACCG CCTCCTCAAG
ACCGTGGCCT ATGAAGCCGA CGGCGAGCTG GTTTTGGCGG TCATAAGAGG AGATTTTTCC
GTTTCCGCCA CCAAGCTCGC CAACCACCTG AAGGCCGTCA AGGTGGATTT TGCCCCTGAA
AAAAGTCTTT CGGCCAGGGG GCTGCATGCC GGGTTCCTCT CTCCGGTGGG CCTGCACGGT
GTGAAGATCG TGTGCGACGC CTCGGTGACG GGGCCGGCTC CCTTTGTTGC GGGTGGAAAC
GCGCCCGACG TCCACTACAG GAACGTCGTC TGCGGGCGCG ATTTCACGCC CTTCGATGCG
GCCGATCTCG CGGAGGTGCG CGACGGCGAC CGCTGCACCC GGTGCGCCGA GGGGATTCTG
CGTATCCGGC GGGGGATCGA GCTGGGGCAC ACGTTCAAAC TGGGCACGAA ATACACCGCC
GCGGAAAGCA TGGACGCCAC GTATCTCGAT GCCGCGGGGA ATCAGCAGCG TGTGGTCATG
GGATGCTACG GCATAGGCGT TGAGCGGCTG ATGGCGTCCG CGGTTGAGCA GTGGCACGAC
GAGGGCGGCA TGAGCTTTCC ATACAGCATC GCGCCATTCC AGGTGATTCT CTGTTCACTG
GGCAGGAAAC CCGAAATCCT GGAGGCGGCG CAAGCACTCT ATGAACGACT TGGCGCCCAT
TATGACACCA TCTATGACGA TCGCGACGAA TCCCCGGGAG TGAAACTCAA GGATGCGGAC
CTGCTGGGGG TCCCCATTCG GGTCGTCGTG AGTCAGAAGT TGCTGCAAAA GGGTGAAGTG
GAAATCAAGG TCAGGCGAAC CGGCGTCGTG ATCGTTTGCC CCCGGGATGA GCTGCTGGAA
ACCTTGGAGC GGATCGTCGC CGACCTGCAG CCTTCGTTTG AAGGCTTGCC GTTCATGCCG
GAATAG
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| Protein sequence | MRYSKYFIHT LFEVPKEAET PSHILLLRGC YIHPVAAGVY SLLPLGHRVA EKIKAILREE
LNAIEGLEVT MPVLNPAELW KKSSRYYDIG QELFRIKDRK DREFVLAMTH EEVITDIARQ
FLRSYRHLPV MLYQIQTKIR DEARPRAGLL RVREFFMNDA YSFHPDFADL DAYYPRIFNA
YLRIFTRCGL TTVPIEADSG IMGGTGSHEF MLESPNGEDR FVVCTQCDYR ANTEKAQGLI
PPVKYSGDAP PPMEAVPTPG IKTIADLMRF FDCPEDRLLK TVAYEADGEL VLAVIRGDFS
VSATKLANHL KAVKVDFAPE KSLSARGLHA GFLSPVGLHG VKIVCDASVT GPAPFVAGGN
APDVHYRNVV CGRDFTPFDA ADLAEVRDGD RCTRCAEGIL RIRRGIELGH TFKLGTKYTA
AESMDATYLD AAGNQQRVVM GCYGIGVERL MASAVEQWHD EGGMSFPYSI APFQVILCSL
GRKPEILEAA QALYERLGAH YDTIYDDRDE SPGVKLKDAD LLGVPIRVVV SQKLLQKGEV
EIKVRRTGVV IVCPRDELLE TLERIVADLQ PSFEGLPFMP E
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