Gene Sfum_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1266 
Symbol 
ID4460693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1564056 
End bp1564559 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content64% 
IMG OID639702035 
Productcalcium-binding EF-hand-containing protein 
Protein accessionYP_845393 
Protein GI116748706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.375458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGAT CAATCGGATT TCTTCAGCTT GCGGTCGCCA TGACCATAAT ATTCGCCGCC 
GGAGCGGCGG GTGCGCAAAT GAGCGGTCCG GACCGCCAGG CGCGATTCGA TGCCCTGGAT
ACCGACTACG ACGGCAGGGT CAGTCACGAC GAATTTGTTT CGGATGCGAA GGCACGGGCG
GAAAGGCTTT TCGGCAGGTT GGACACCCAC GGTGACGGGT ATTTCACCGG CGATCAAGTG
GACAAAGCCC GAAAAGACGC CGCGGAGCGC CGGGGCGGAG CGCCCCCCAG AGGGGCGCAG
CCCCGGTTCC AGGGTATGGA TGCCAGCCGT GACGGCAAGG TGTCTCATGA CGAGTTCATG
TCCGGCTCAG CGGTGCAGGC CGAACGGCGG TTCCGGCGGA TGGACGTCAA CGGCGACGGG
TACCTCAGCC GGGAGGAGTT TCTGGGGGCG CGCACGCAGA AGCCGAAACG GCTGGATGAC
CGCTCGGAGC CGCCGGTGCG ATAA
 
Protein sequence
MSRSIGFLQL AVAMTIIFAA GAAGAQMSGP DRQARFDALD TDYDGRVSHD EFVSDAKARA 
ERLFGRLDTH GDGYFTGDQV DKARKDAAER RGGAPPRGAQ PRFQGMDASR DGKVSHDEFM
SGSAVQAERR FRRMDVNGDG YLSREEFLGA RTQKPKRLDD RSEPPVR