| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1248 |
|---|
| Symbol | |
|---|
| ID | 4461373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1542044 |
|---|
| End bp | 1542556 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639702016 |
|---|
| Product | CMP/dCMP deaminase, zinc-binding |
|---|
| Protein accession | YP_845375 |
|---|
| Protein GI | 116748688 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2131] Deoxycytidylate deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.639553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGG ACCGCTATTT CCTGGAGATT GCCACGGCCG TGGCAAACAA CAGCAAATGC
CTCTCGCGCA AGATCGGCGC TCTGCTGGTC CGCGACAAAT CCATCATCAG CACGGGGTAC
AACGGGCCGC CCAGAGGCGT TCCGCACTGC AACCGGCGTT ACGTCATCGA TCCGAGTGTG
AGCGCCATCA TGCCGACTCA CATGATGGGC AAAGAAATGG ATCTATGCCC GCGCAAAGCT
TTGGGCTACA AGTCGGGAGA AGGACTGCAC CTGTGCATCG CATCGCATGC CGAAGTGAAC
TGCATCAACA ACGCGGCGAG GAACGGAATA TGCACCCTCG GCAGCACCCT GTACCTTTCT
TCTGCGTTCC TGCCCTGCAA GAACTGCCTT TGCGAGATCA TCAACGCCGG AATCAAGGAA
ATCGTCGTTC GGGAGATTCA GCCATACGAC CCGACCAGCC TGTTTATCCT GGAGCACAGC
GACCTGTCCA TCAGGACGTA CAAGCTCGGC TGA
|
|---|
| Protein sequence | MDWDRYFLEI ATAVANNSKC LSRKIGALLV RDKSIISTGY NGPPRGVPHC NRRYVIDPSV
SAIMPTHMMG KEMDLCPRKA LGYKSGEGLH LCIASHAEVN CINNAARNGI CTLGSTLYLS
SAFLPCKNCL CEIINAGIKE IVVREIQPYD PTSLFILEHS DLSIRTYKLG
|
|---|
| |