Gene Sfum_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1209 
Symbol 
ID4460634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1495478 
End bp1496224 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content55% 
IMG OID639701976 
Producthypothetical protein 
Protein accessionYP_845337 
Protein GI116748650 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.51797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTAGCC AACTCAGATG CCTGATTCAA TACCAGATAC TGGAGAACAA GAAGAACCTG 
CTTGTCCGCG GGTGCGAGGA AACACCCCGG CGTGTTTCCG AAATCGAAAA GGAGTTCGAG
CATTTTGAAG CCGAGTACCT GGCGAGGAAG GCCGAACACG AGCTCGCCTT GAAGAACCGC
AAGTCGCTGG AACAGAATAT CGCCGACCTG GAAAACAAGA TCGCCAGGAG CAAGTCCCGG
ATGAGCGAGG TCAAGACAAA CAAGGAATAC CAGGCCATCC TCAAAGAGAT CGAAGATATC
AAGAAGGATA TTGCGAGCAA GGAGGACAGC GCGCTCGAGC AGATGGAAAA GATCGAGGCG
CTTGGCCGGC AGGTCAAAGA CCTGGAGAAG GATCTGGCCG CCCAGAGGCA GAAGCTCGAG
GAAAACAGGC AGAAGCTCGA AAGTGAAAGC GCACAGCTGA AGGAACGGCT GGATTACCTC
GAGGGGCTGC AGCAGAAAGT ACGCGAGAAG CTTGAACCGG AACTGGTGAA GCGCTCCGAC
TTCCTGTTCA AGAAGCAGGC GGGCATTGCG GTAGCCGCGG TGGAGAACGG GGTTTGCCAG
GTATGCCATC TGAATATTCC CCCTCAGAAG TTCATCGAGC TTCAGCGGGA CGATGCCATC
CTGCAATGCC CTCATTGCCA CCGGTTCCTG TATTGGCCCG GCCACGAAGG ATACTGCGTC
AGGGAAGAAG AGCTCGAAGA CCTGTGA
 
Protein sequence
MLSQLRCLIQ YQILENKKNL LVRGCEETPR RVSEIEKEFE HFEAEYLARK AEHELALKNR 
KSLEQNIADL ENKIARSKSR MSEVKTNKEY QAILKEIEDI KKDIASKEDS ALEQMEKIEA
LGRQVKDLEK DLAAQRQKLE ENRQKLESES AQLKERLDYL EGLQQKVREK LEPELVKRSD
FLFKKQAGIA VAAVENGVCQ VCHLNIPPQK FIELQRDDAI LQCPHCHRFL YWPGHEGYCV
REEELEDL