Gene Sfum_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1176 
Symbol 
ID4461557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1456874 
End bp1458001 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content60% 
IMG OID639701943 
Producthypothetical protein 
Protein accessionYP_845304 
Protein GI116748617 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.390877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAG AAGAAGCAAT CAAGACGTAT CGGACTTTCT ATTGCCTCGA CTGCGGGGTC 
TGTACCGGAA GTTGCCCGGT TTCCAGGGTG CACCCTTCGT TCTCCCCGAG GATCATCGTC
GAAAAGGCCC TGCTGGACCT GGGAGACGAA CTGCTCAAAG ACCGGGAGCT CTGGTCGTGC
CTCACCTGCG GGCGCTGCTT CGAGCGCTGC CCGACCAACA TCGATTTCCC CGAATTCATG
CGGGCGCTGC GCGAGGAAGC CGCCAGGCGG GGCACTTCCC CGCTGCTGTC CCATCACGGC
ATGCTGCAGA CCGTCATGGA AATGCAGACC CAGGGCATTC GTCAGAACAA AACGGCCTGG
GCCAGGGAGG CCGGGGAGAT CGCGCAAACG GGCGACACGT TTTTCTTCGT GGGCTGCATG
CCCTACTTCG ACGTGATATT CCGGGACATC GGCGTCGACA GCCTGACCAC CAGCCGCAAC
GTGCTCAAGA TCCTCAACGC GGCTGGCGTC GTCCCCGTGG TGTCCGACGA GGAAGCCTGC
TGCGGCCACG ACATGCTCTG GAACGGCAGG CCCGACACGT TCAGGAAACT CGCCTCCGCC
AATATCGAGC TGATCCGGAA GTCGGGGGCC AGGCGCGTCG TTTTCAGCTG CCCCGAGGGG
TACTACACCT TCAAGCACCA CTACCCCCAG TACTTCGGCA AGCTCGATTT CGAGCTCGTC
CATTTCTACG ACTTCCTGAG CGAATTGATC GCCGACGGGG CCATCAAGCT CGTCGACGGC
GGATCGACCT TCACCTACCA CGACCCGTGC CGGCTGGGGC GCATGGCCAA GATTTACGAC
AGCCCGCGCA GGATCCTGGA AAAGGTGGAA GGCTCGCGTT TCGTGGAAAT GGAACGCAAC
CGTGAAAACG CCGTCTGCTG CGGCACCAGC GGCTGGGCCA ACTGCTCGAT CTGTTCCAAG
CAGATCCAGG TGGAACGACT TCGGGAAGCC AAGAGCACAG GGGCTTCAAC CCTGATCACC
GCCTGTCCCA AGTGCCAGAT CCATCTCAAC TGCGCACTCG CGAGCATGGA CCTCGAAATC
GGCATAAAGG ATCTGACCAC TTTTGTCGCG GAAACTATGC ACAAATGA
 
Protein sequence
MNVEEAIKTY RTFYCLDCGV CTGSCPVSRV HPSFSPRIIV EKALLDLGDE LLKDRELWSC 
LTCGRCFERC PTNIDFPEFM RALREEAARR GTSPLLSHHG MLQTVMEMQT QGIRQNKTAW
AREAGEIAQT GDTFFFVGCM PYFDVIFRDI GVDSLTTSRN VLKILNAAGV VPVVSDEEAC
CGHDMLWNGR PDTFRKLASA NIELIRKSGA RRVVFSCPEG YYTFKHHYPQ YFGKLDFELV
HFYDFLSELI ADGAIKLVDG GSTFTYHDPC RLGRMAKIYD SPRRILEKVE GSRFVEMERN
RENAVCCGTS GWANCSICSK QIQVERLREA KSTGASTLIT ACPKCQIHLN CALASMDLEI
GIKDLTTFVA ETMHK