Gene Sfum_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1159 
Symbol 
ID4460237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1437092 
End bp1437538 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content54% 
IMG OID639701926 
Producthypothetical protein 
Protein accessionYP_845287 
Protein GI116748600 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTC GTGAGCGTGC GGAGGCAAGA GACCTGGTGA GGAAAGCCGT CGCGTTCTGC 
GAAGATGCGG GCAGGGGCGC GGCTCTGGCT GAGATTGCCG ACAGGAACGG CCAATTCGTC
CGGAATGGTT ACTACTCCTA TGCATTGGAC CTGACGGGAA CGGTTTTGGC CCACCCTTTC
GCTACCGAGC TGACGGGCCG CGATTGCATC AAGCTTGAGG ATTCCAATGA AAAACCTTTC
ATTCGAAGGA TCCTCGATAT CGCGAAGAGC AAAGGTTATG GTTTTGTCGA CTACCTATGG
CATAGACCCT CTTCCAGGGA GGAACTCCGC AAGACCGTCT ACCTGGAGCG CGTGGAGGAC
ATGGTTTTTT GCTGCGGGTT CTATACCACC GAGCAGGATT ATCTGGTAAG CCTTTTCAAG
TGTTATGATT ATGCAGGTCC GATGTGA
 
Protein sequence
MNTRERAEAR DLVRKAVAFC EDAGRGAALA EIADRNGQFV RNGYYSYALD LTGTVLAHPF 
ATELTGRDCI KLEDSNEKPF IRRILDIAKS KGYGFVDYLW HRPSSREELR KTVYLERVED
MVFCCGFYTT EQDYLVSLFK CYDYAGPM