Gene Sfum_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1141 
Symbol 
ID4460219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1418429 
End bp1419220 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID639701908 
Producthypothetical protein 
Protein accessionYP_845269 
Protein GI116748582 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAA AAAATTTCAG CGAAGCGGCG GAATCCGTCC GCAACGATCT CAGGCTCAAG 
ACATTCCCGG TTGCCGCAAA GTTTCTCGAG GAGAAAAAGG GATATCCCGA GAAGACTTGT
TGGCCTTCCA CGACCCTGGG GAAGCGAATC GCACTTTGCC AGGGGGTCAC CATGGCCCGC
AACTACGGCT GGACCGTGGG GATCGGAAGG GAGGACCTCG TCTGCGTTCC GGCAGCCATC
GTGTTCGGTA TGAGCGACGC ATCATCCCCG CCGGCATCGC TTGGGCGGCT TTTCTGCGAC
ACAGGGTTTT CCTCCGGCGA ATCCACGGCC GAAAAAGAAG CGGCATCGAT GAGCCGGTTC
GAGAACGGAG AAATCCGGGC CGTTCTCGTC GCGCCTCTCG CCAGGACCGC GTTTGAACCC
GATACGATAG TGTTCTACGG CAACCCGGCC CAGATGATGC GCTTCGCCCA GGCATGGTCG
TATGTCAGGG GAGACAGGGT TCCCGGCCAT TTCGGGGGGA AGGTGGAATG CGACGAGTAC
CTCATAGCTC CCTTCAAAAC GCAATCCGCG CGGATGGTCC TGCCGGGAAA CGGGGAACGG
ATTTTCGCGG CGACGCAGGA CGACGAAATG GTGTTCGCCA TTCCCGGCAG CGCTCTGACG
GATCTGATCG AGGGACTGAA GGCGGCGGGG AAGGCCGTGG GAGCGCGCTA CCCGGTGACT
CCCTACCAGA ACTTTCAGCC CGATTTTCCA AAGGCGCACA AGAAGCTCGG CGCGGAAATC
GGGGTCCTGT AG
 
Protein sequence
MNQKNFSEAA ESVRNDLRLK TFPVAAKFLE EKKGYPEKTC WPSTTLGKRI ALCQGVTMAR 
NYGWTVGIGR EDLVCVPAAI VFGMSDASSP PASLGRLFCD TGFSSGESTA EKEAASMSRF
ENGEIRAVLV APLARTAFEP DTIVFYGNPA QMMRFAQAWS YVRGDRVPGH FGGKVECDEY
LIAPFKTQSA RMVLPGNGER IFAATQDDEM VFAIPGSALT DLIEGLKAAG KAVGARYPVT
PYQNFQPDFP KAHKKLGAEI GVL