Gene Sfum_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1125 
Symbol 
ID4457951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1404084 
End bp1404590 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content62% 
IMG OID639701892 
Producthypothetical protein 
Protein accessionYP_845253 
Protein GI116748566 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTGGG GATCGCGCGG AACCAATCGG GATGACTGTG GAGAGTGGAG GAAACGCATG 
CAGTACGGTG TTGGGGAAAT GGGGCGCATC TTCGTGTTGC GCCTGGAAGA AGGGGATCAG
TTGCCCGACA TAGTGGAGCA ATTCGCCGAG GAACACGGTA TACAGCGGGG ACTCGTCTTC
TACGTGGGGG GCGGAGCCGA CGGCAGTCGC CTGGTGGTTG GGCCCCGGGA GAATATGGAA
CAGGGGATCG TCCCGATGCT GCACACTCTG CGGGGAGTCC ATGAAGTGCT GGCCGTGGGG
ACCCTTTTCC CCGATGATGC GGGAGTCCCG GTGCTGCACC TGCATGCCGC CGCCGGCAGG
GAAGACAAGG TTGCCGTCGG TTGCGCCCGC GCCGGCGTCA AGGTCTGGCT GGTGGGGGAA
GTCGTCTTGC TCGAGATCGC CGGGATCGAA GGGCGACGGG AAAAGGAAAG GGGTTTCTCA
CTGCTCAGGT TTTCCTCTGA TGAATGA
 
Protein sequence
MGWGSRGTNR DDCGEWRKRM QYGVGEMGRI FVLRLEEGDQ LPDIVEQFAE EHGIQRGLVF 
YVGGGADGSR LVVGPRENME QGIVPMLHTL RGVHEVLAVG TLFPDDAGVP VLHLHAAAGR
EDKVAVGCAR AGVKVWLVGE VVLLEIAGIE GRREKERGFS LLRFSSDE