Gene Sfum_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1122 
Symbol 
ID4457948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1398136 
End bp1400199 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content57% 
IMG OID639701889 
Producthypothetical protein 
Protein accessionYP_845250 
Protein GI116748563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.477983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGC CCCTAGAAGG AAGACGCGCG GGTGAGGAGA AAAGACTCTG CCCGAGATTC 
CTGACCGCCG ACGGTTTGAC CAATACAGCC GAGCGGTGGC GCCCCACGGG AATTCTTATT
TGCAGGACGG AGACATCTCG GAGTGTGCCC GATGTGGAGA AGTCCGCCTC GGGGCAGGCC
GATTCCCGCG GGAAACATGC CCAAGCCGGG CCTTTTGAGA AGATCAGTGA TATGTATATC
ATTGATTTTT CGGAAAAGGG TGCGCAAGTC TATTTTGAGT GCGACAATCA GGCGAGAATC
CTGACCAGTG AATTTTTCCT TCAAGTGGGT ATCACCAGGG TTCCTGTTTG CCCAAGCTGG
TATCAACTGT CTCCTAATGG AAACACCGCT GGTTTTGAAT TCAATCATCA ACCGGAGCAC
AGCTGTGATC TTGCACATTT ACTGGTTTAT TTGAGTGATG ATCTGTTAAA CTTTTTGATC
AATGAACACA TTCCGTCATT GACTCCTCTG AACAGCCAAG TATGCACCTA TGCTTATCTG
AGTATATTCT ATAACTTAAG GCTGAAATTC CTTGAATGTA TTGCTTTGTT TAACAAAGCC
AGGGAACGTG TTGAGCAGTT CGTAAATTCC CATCATCATG AAGAGATGAT GCACATATTC
CTTGAGTTTG AGAGCTTGAG ATCGCTGCAT CTCAAACAGG CGAGGGCTTT ATCCAAAGAC
AAGGATCCGA ATGCCACGCT GGAACCTTTT GTAAAACCAT TCCGGGAGCT TGGGTGCGGT
ATATCCTGGA AAGCTCAACA GCTCCGGTTT CACGAAAGCG ACGTATTGAG TGTTCTTGCA
GACTCCATCG TTTTCTGGGA CTGGAAAGTC CATCCCTCCT GTGGGCTTGC CGAACGCGTG
AAGCCTGCCC ACGATGCGTT CATGGCCCTC AGAACCATTT TGCCGGGCGT GTTCGAAGGC
GAAGCGTTCG ACAACCAGTT CGACTACTAT AGCTTTTTGA TCCGTTCGAC AACGCGGCTC
AAGAACAGGC TGATCGACCT CGTGTCGGCT CCTATGTCCA GTGTGGAGAC CGCGAGGGTG
AGGGGCAGGA TGCCGGAGCT CCTCGCTTCC CGGGAGTCCG ACCGGGTTCC TGCGCTGGGC
ACCATCCCTC GGTTGATGGA GAAGGGGCGG TTCGAAGAAA TCGGGACTCC CGCCCTGGAA
GAAAAGCTGG TCGAGGCGTA CGGACAGAGC CTGGGTGTGG AACCAGCCTC CGGAGAGGGG
GACATCACGG TCAAGGGGCT TCAGCTGCCT TACGGGCAAA GTATTCCTCC GCCACGGGTC
GGGCCGGGTC CCATTCGGCC GTACAAGTAT CTCGCCGTCC TTCTTGCGGC AGTCGTGGCA
TTCGCCGTCG CAGGCCTTCT GAGCCGGCCG GGGATGCAGG TTTTTTGGAA AAGCCGGGAT
GTCGGCACGG ACCGCGTGAG CACGCGGACA GTTCCCTCCG ATGCCGTGCC GCAAGAGGCG
CCGCCCCGGG AGTCTGAGGC CGGGAACGGC GTGGAGGCGA AAGTCGAGAG CGGTGTGCAG
CCGAGTGTTC TCCCTTCCGA TACGGTTCCC GACTCGGTGT CCGAGTCATT GACGGGGGAC
ATCTCCGGCG GGGAGCCCGA ACGTGTGGCG GAGGAGGGGG GCGGGAACGA GGCGCCGAAG
CACGAGGCTG CGGCCGATGC CGCGCCTGCC GATTCCCGGG AGGCAGCTCT TCCCGCAGGT
GAGGTTGTTG AAGAGCCGTC GCCGGAAACC ACTCCGGCTG CTCCCTCGCG CAAGGAGTTG
GTGCACAGAT TCGAGATCGA AGCAGGCCAG AAGTGCTGGA TTCAGGTGAA GATCGACGGC
GAGAAGGCCT GGAGCGCCAT GATGAAGCCC GGTGACCGAT TCGACTGGGA AGTGAAAGAG
CGGATCGACA TCCTGGTCGG GAACAGCGGC GGGGTTCGAG TGAAGTGGGA TGGTCAACTG
CTTGGCCAGG TCGGCATGGT GGGCCAACCC GTGCGGTTGA CTCTCCCCAA TCCCCAGCTG
ATTTCAAAGG TCAAAGCGGA CTGA
 
Protein sequence
MSEPLEGRRA GEEKRLCPRF LTADGLTNTA ERWRPTGILI CRTETSRSVP DVEKSASGQA 
DSRGKHAQAG PFEKISDMYI IDFSEKGAQV YFECDNQARI LTSEFFLQVG ITRVPVCPSW
YQLSPNGNTA GFEFNHQPEH SCDLAHLLVY LSDDLLNFLI NEHIPSLTPL NSQVCTYAYL
SIFYNLRLKF LECIALFNKA RERVEQFVNS HHHEEMMHIF LEFESLRSLH LKQARALSKD
KDPNATLEPF VKPFRELGCG ISWKAQQLRF HESDVLSVLA DSIVFWDWKV HPSCGLAERV
KPAHDAFMAL RTILPGVFEG EAFDNQFDYY SFLIRSTTRL KNRLIDLVSA PMSSVETARV
RGRMPELLAS RESDRVPALG TIPRLMEKGR FEEIGTPALE EKLVEAYGQS LGVEPASGEG
DITVKGLQLP YGQSIPPPRV GPGPIRPYKY LAVLLAAVVA FAVAGLLSRP GMQVFWKSRD
VGTDRVSTRT VPSDAVPQEA PPRESEAGNG VEAKVESGVQ PSVLPSDTVP DSVSESLTGD
ISGGEPERVA EEGGGNEAPK HEAAADAAPA DSREAALPAG EVVEEPSPET TPAAPSRKEL
VHRFEIEAGQ KCWIQVKIDG EKAWSAMMKP GDRFDWEVKE RIDILVGNSG GVRVKWDGQL
LGQVGMVGQP VRLTLPNPQL ISKVKAD