Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1122 |
Symbol | |
ID | 4457948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1398136 |
End bp | 1400199 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639701889 |
Product | hypothetical protein |
Protein accession | YP_845250 |
Protein GI | 116748563 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.477983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGAGC CCCTAGAAGG AAGACGCGCG GGTGAGGAGA AAAGACTCTG CCCGAGATTC CTGACCGCCG ACGGTTTGAC CAATACAGCC GAGCGGTGGC GCCCCACGGG AATTCTTATT TGCAGGACGG AGACATCTCG GAGTGTGCCC GATGTGGAGA AGTCCGCCTC GGGGCAGGCC GATTCCCGCG GGAAACATGC CCAAGCCGGG CCTTTTGAGA AGATCAGTGA TATGTATATC ATTGATTTTT CGGAAAAGGG TGCGCAAGTC TATTTTGAGT GCGACAATCA GGCGAGAATC CTGACCAGTG AATTTTTCCT TCAAGTGGGT ATCACCAGGG TTCCTGTTTG CCCAAGCTGG TATCAACTGT CTCCTAATGG AAACACCGCT GGTTTTGAAT TCAATCATCA ACCGGAGCAC AGCTGTGATC TTGCACATTT ACTGGTTTAT TTGAGTGATG ATCTGTTAAA CTTTTTGATC AATGAACACA TTCCGTCATT GACTCCTCTG AACAGCCAAG TATGCACCTA TGCTTATCTG AGTATATTCT ATAACTTAAG GCTGAAATTC CTTGAATGTA TTGCTTTGTT TAACAAAGCC AGGGAACGTG TTGAGCAGTT CGTAAATTCC CATCATCATG AAGAGATGAT GCACATATTC CTTGAGTTTG AGAGCTTGAG ATCGCTGCAT CTCAAACAGG CGAGGGCTTT ATCCAAAGAC AAGGATCCGA ATGCCACGCT GGAACCTTTT GTAAAACCAT TCCGGGAGCT TGGGTGCGGT ATATCCTGGA AAGCTCAACA GCTCCGGTTT CACGAAAGCG ACGTATTGAG TGTTCTTGCA GACTCCATCG TTTTCTGGGA CTGGAAAGTC CATCCCTCCT GTGGGCTTGC CGAACGCGTG AAGCCTGCCC ACGATGCGTT CATGGCCCTC AGAACCATTT TGCCGGGCGT GTTCGAAGGC GAAGCGTTCG ACAACCAGTT CGACTACTAT AGCTTTTTGA TCCGTTCGAC AACGCGGCTC AAGAACAGGC TGATCGACCT CGTGTCGGCT CCTATGTCCA GTGTGGAGAC CGCGAGGGTG AGGGGCAGGA TGCCGGAGCT CCTCGCTTCC CGGGAGTCCG ACCGGGTTCC TGCGCTGGGC ACCATCCCTC GGTTGATGGA GAAGGGGCGG TTCGAAGAAA TCGGGACTCC CGCCCTGGAA GAAAAGCTGG TCGAGGCGTA CGGACAGAGC CTGGGTGTGG AACCAGCCTC CGGAGAGGGG GACATCACGG TCAAGGGGCT TCAGCTGCCT TACGGGCAAA GTATTCCTCC GCCACGGGTC GGGCCGGGTC CCATTCGGCC GTACAAGTAT CTCGCCGTCC TTCTTGCGGC AGTCGTGGCA TTCGCCGTCG CAGGCCTTCT GAGCCGGCCG GGGATGCAGG TTTTTTGGAA AAGCCGGGAT GTCGGCACGG ACCGCGTGAG CACGCGGACA GTTCCCTCCG ATGCCGTGCC GCAAGAGGCG CCGCCCCGGG AGTCTGAGGC CGGGAACGGC GTGGAGGCGA AAGTCGAGAG CGGTGTGCAG CCGAGTGTTC TCCCTTCCGA TACGGTTCCC GACTCGGTGT CCGAGTCATT GACGGGGGAC ATCTCCGGCG GGGAGCCCGA ACGTGTGGCG GAGGAGGGGG GCGGGAACGA GGCGCCGAAG CACGAGGCTG CGGCCGATGC CGCGCCTGCC GATTCCCGGG AGGCAGCTCT TCCCGCAGGT GAGGTTGTTG AAGAGCCGTC GCCGGAAACC ACTCCGGCTG CTCCCTCGCG CAAGGAGTTG GTGCACAGAT TCGAGATCGA AGCAGGCCAG AAGTGCTGGA TTCAGGTGAA GATCGACGGC GAGAAGGCCT GGAGCGCCAT GATGAAGCCC GGTGACCGAT TCGACTGGGA AGTGAAAGAG CGGATCGACA TCCTGGTCGG GAACAGCGGC GGGGTTCGAG TGAAGTGGGA TGGTCAACTG CTTGGCCAGG TCGGCATGGT GGGCCAACCC GTGCGGTTGA CTCTCCCCAA TCCCCAGCTG ATTTCAAAGG TCAAAGCGGA CTGA
|
Protein sequence | MSEPLEGRRA GEEKRLCPRF LTADGLTNTA ERWRPTGILI CRTETSRSVP DVEKSASGQA DSRGKHAQAG PFEKISDMYI IDFSEKGAQV YFECDNQARI LTSEFFLQVG ITRVPVCPSW YQLSPNGNTA GFEFNHQPEH SCDLAHLLVY LSDDLLNFLI NEHIPSLTPL NSQVCTYAYL SIFYNLRLKF LECIALFNKA RERVEQFVNS HHHEEMMHIF LEFESLRSLH LKQARALSKD KDPNATLEPF VKPFRELGCG ISWKAQQLRF HESDVLSVLA DSIVFWDWKV HPSCGLAERV KPAHDAFMAL RTILPGVFEG EAFDNQFDYY SFLIRSTTRL KNRLIDLVSA PMSSVETARV RGRMPELLAS RESDRVPALG TIPRLMEKGR FEEIGTPALE EKLVEAYGQS LGVEPASGEG DITVKGLQLP YGQSIPPPRV GPGPIRPYKY LAVLLAAVVA FAVAGLLSRP GMQVFWKSRD VGTDRVSTRT VPSDAVPQEA PPRESEAGNG VEAKVESGVQ PSVLPSDTVP DSVSESLTGD ISGGEPERVA EEGGGNEAPK HEAAADAAPA DSREAALPAG EVVEEPSPET TPAAPSRKEL VHRFEIEAGQ KCWIQVKIDG EKAWSAMMKP GDRFDWEVKE RIDILVGNSG GVRVKWDGQL LGQVGMVGQP VRLTLPNPQL ISKVKAD
|
| |