Gene Sfum_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1108 
Symbol 
ID4461078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1377772 
End bp1379187 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content59% 
IMG OID639701873 
Producthypothetical protein 
Protein accessionYP_845236 
Protein GI116748549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATTT GTGCCGGCCT CCGGGCCAGA GCAATAAATC CCATGAGGAT TCGGGCAACG 
CGAAGGAACC CCTTGAAGAC CCCCTTCAGC TTGCCTGGAT TTCCGAGACC GACCCTGACC
GTTGCCTCGC TGTTATTGTC CTGCATCCTG AGCTGCTCGG CCGTTGCATG GGCGGGGTGG
GTGCAACGTT ACGGGGGAGG CGACTTTGCG ACCGGGATCG CTGTGGACCG CGGCGGGAAT
GTCTACGTAA CCGGCGAATC AACGGGTAAC CACACCTACC TCGATTATGC AACCGTCAAG
TACGACAGGT ACGGAAGCCG CAAATGGGTG GCTCGATATA ACGGCCCGAA AAATTACAAT
GACGAGGCTG CGGCCATCGC CTTGGACCGC GACGGGAACG TCTACGTCAC GGGCACATCG
ATGGGACTTG ATTCAGGCTA CGATTATGCC ACCGTCAAGT ACGACACGAA CGGGAAGCGG
CAGTGGGTGA GACGGTACAA CGGCCCTCAG AATAAGAACG ACAAAGCCGT GGCCCTGGCC
GTTGACGGCG GCGGGAACGT CTATGTGACC GGCCGTGTCG ACGGCGAATC CACTTACAGC
CATTTTGGGA CGATCAAGTA TGATACGAAC GGGAAACGGC AGTGGGTGAG GCATTACAAG
GGTCCCTGGA ACGCCAGGAC CCCCATCGGC ATAGCGCTGG ACGGCATAGG AAACGTCTAT
GTCGCGGGCG CAGCCGATCC GGAGAACTAC GACTATGTGA CCATCAAGTA TGGTGCGGAT
GGCGGCCTGA AGTGGGAGCG GCACTACAAC GGCCCGGGTG GGCTTTACGA TATGCCCGCG
GCAATGGCCG TGGACCGGAG CGGAAACGTT TATGTCACGG GAGGTTCGAT GGGGTCGGAA
GATTACGGCT CGCTGGACTA TGCCACCATC AAGTATGACA CGGAAGGAAA CGAGAAGTGG
GTGAGGCGCT ACAACGGTCC TCGGAATGAA AACGACACGG GTAAGGCCAT AGCCGTGGAC
TCCGCCGGCA ACGTCTACGT GACGGGCGAA GCCGAGGGCA TTTACTCATA CCTCGACTAC
ACGACCATCA AATACGACGC GGATGGAAAC CGGCAGTGGA TAAAACGCCT CCAGGGGCCT
CACGATGCGT GGGATACCCC GACCGCGATA GGCGTGGACT CCGCGGGCAA CGTGTACGTG
ACGGGCCAGG CGGTGGACGC TTCCGGACTC TCGAAGTACG GAACCGTCAA GTACGATACG
GATGGAAACC GGCAATGGGT GAGGATGGAA GTGGTGGGCA CAGCCACGGC TCTGGTCGTG
ACCGCCGGCG GGAATGTCTA CGTCACGGGC GGTTCGCCTA ATATGTACTC CGGCGCGGAT
TATGTAACCA TCAAATACGA TACGAACGGG AACTGA
 
Protein sequence
MKICAGLRAR AINPMRIRAT RRNPLKTPFS LPGFPRPTLT VASLLLSCIL SCSAVAWAGW 
VQRYGGGDFA TGIAVDRGGN VYVTGESTGN HTYLDYATVK YDRYGSRKWV ARYNGPKNYN
DEAAAIALDR DGNVYVTGTS MGLDSGYDYA TVKYDTNGKR QWVRRYNGPQ NKNDKAVALA
VDGGGNVYVT GRVDGESTYS HFGTIKYDTN GKRQWVRHYK GPWNARTPIG IALDGIGNVY
VAGAADPENY DYVTIKYGAD GGLKWERHYN GPGGLYDMPA AMAVDRSGNV YVTGGSMGSE
DYGSLDYATI KYDTEGNEKW VRRYNGPRNE NDTGKAIAVD SAGNVYVTGE AEGIYSYLDY
TTIKYDADGN RQWIKRLQGP HDAWDTPTAI GVDSAGNVYV TGQAVDASGL SKYGTVKYDT
DGNRQWVRME VVGTATALVV TAGGNVYVTG GSPNMYSGAD YVTIKYDTNG N