Gene Sfum_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1101 
Symbol 
ID4460540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1368829 
End bp1369713 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID639701865 
Productanaerobic cobalt chelatase 
Protein accessionYP_845229 
Protein GI116748542 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4822] Cobalamin biosynthesis protein CbiK, Co2+ chelatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAC CCTGGTTTTT GATGAGCGCC CTGATGATGC TGGGCCCGTT CGCTTCGGAA 
AGGAGCTTCG TCTCCGGCGG AGGGCGGGAC CGGCCGGCCC GCCGGGCGAT TCTCCTGGTG
GCTTTCGGGA CGAGCGTTCC GGAGGCGCAA AAGTCCTTTG ACCGAATCCA GGACGGGGTG
GAGGCCGCTT TCCCGGGCGT CGAGGTCAGG TGGGCTTACA CATCCCGCGT CATCAGAGCG
AAGGCCGCCT CCCGGGGGCG GCGCCTGGAT TCGCCCGAGA CCGCTCTTGC AAAGCTGATG
GACGACGGAT ACACCCATGT CGCCCTGCTC TCTCTCCATG TGATTCCCGG AAAGGAATTC
CACGAGTTGT ACCGGAACGC CCGGCTCTTC GGGGATATGG CGGGTGGGTT CGAAAAGATC
GAAATCGCCA TGCCCCTCAT CGCATCGCAT GAGGACACGC TCCGCGTGGC GCGCGCGCTT
ATCCGGCGCA TTCCCGGGGA ACGAAAACCG GAGGACGCGG TTGTCTTCGC AGGTCACGGT
ACCGGGAAGC ATCCGGCCGA TGCGGTCTAC GGGGCCATGG ACCGCGTGTT GAAGGAAGAA
GCCCGGAACG TCTTTGTGGC CACCGTGCAG GGATATCCGT CCATCGGGGA CGTCGTCCCG
AAACTGGCGG AACAAAAGGT CCGCAGGGCC TGGCTCATTC CCTTCATGAC CGTGGCCGGA
GACCATGTCC GCAACGATAT TTCCGGCGAC AAGCCCGACA GCTGGAAATC CCTGCTCGCA
AAGAACGGGA TCGCCTGCGA AACGGTTTTC TCGGGGCTTG GGGAATACCC GGAAGTCGTG
GAGGTATGGA TCGATCACCT GCGCGAAGCG TACGCGAAGC TGTGA
 
Protein sequence
MQTPWFLMSA LMMLGPFASE RSFVSGGGRD RPARRAILLV AFGTSVPEAQ KSFDRIQDGV 
EAAFPGVEVR WAYTSRVIRA KAASRGRRLD SPETALAKLM DDGYTHVALL SLHVIPGKEF
HELYRNARLF GDMAGGFEKI EIAMPLIASH EDTLRVARAL IRRIPGERKP EDAVVFAGHG
TGKHPADAVY GAMDRVLKEE ARNVFVATVQ GYPSIGDVVP KLAEQKVRRA WLIPFMTVAG
DHVRNDISGD KPDSWKSLLA KNGIACETVF SGLGEYPEVV EVWIDHLREA YAKL