Gene Sfum_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1078 
Symbol 
ID4460843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1332047 
End bp1332955 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID639701843 
Productputative lipoprotein 
Protein accessionYP_845207 
Protein GI116748520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.839732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCA ACGGGACCCC CCGGAGCTGC ACGAGCACCG CCGTCGTTGC GGCGGTGGCC 
AGGGGAGGCG TCATCACCTT CAACTGCGGG CCGGAGCCGG TCACTATCGT TATGAAGAGA
ACGGCCAAGG TGTTCAACGA CACCGGACCC CGGATCGTGA TCGACGGCGG CGGAAAGGTC
ACCCTGAGCG GCGACGGCGC CCGGCGCATC CTGTATATGA ACACGTGTGA CCCCAACCAG
GTCTGGACCA CCGATCATTG CGACAACCAG GATCATCCGC AGCTCACCGT CCAGAACCTG
ACCTTCGTGG ACGGCAATTC CAAAGCCGAC AAGACTTATG ACGGCGGCGG GGCCATCTGG
GTCCGGGGGG GACGGTTCAA GATCGTCAAG TCGCGGTTTT TCAGAAACGT CTGCGCCTCC
ACGGGGCCTG ACGTGGGCGG CGCGGCCGTG CGGGTGTTCA GCCAGTACAT GGGGAAACCG
GTCTACATCG TGAAAAGCAC CTTCGGCGGG GCCGCGGGCT ACGGCAATGT CGGCTCCAAC
GGCGGCGGAA TAAGCAGCAT CGGGGTCTCC TACACGGTTA TAAATTCACT TTTCACGCAT
AACAGGGCCA TCGGTTACGG CGCCAATCCG AAGGAACCCG GCACCCCGGG AGGCGGCAGC
GGCGGGGCCA TCTACAACGA CGGGAATCTG TTCAGGCTCA GACTGTGCGG GACAAAGATC
CAGAACAACC GCGCCCGGGA AGGAGGAGGC GCCATCTTTT TCGTCAGCAA CGATCGCAGC
GGCACGCTGA CCATCAGGAA ATCGGTGTTG CGAAACAATC CCAGCCTTGG ATTCGAAACT
CCCGGCTACC CCGGCATCTT CTACCTCGGG AACGGCGACC CGGTGGTGAT CGATTCCATT
ATCGAATAG
 
Protein sequence
MIGNGTPRSC TSTAVVAAVA RGGVITFNCG PEPVTIVMKR TAKVFNDTGP RIVIDGGGKV 
TLSGDGARRI LYMNTCDPNQ VWTTDHCDNQ DHPQLTVQNL TFVDGNSKAD KTYDGGGAIW
VRGGRFKIVK SRFFRNVCAS TGPDVGGAAV RVFSQYMGKP VYIVKSTFGG AAGYGNVGSN
GGGISSIGVS YTVINSLFTH NRAIGYGANP KEPGTPGGGS GGAIYNDGNL FRLRLCGTKI
QNNRAREGGG AIFFVSNDRS GTLTIRKSVL RNNPSLGFET PGYPGIFYLG NGDPVVIDSI
IE