| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1040 |
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| Symbol | |
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| ID | 4460648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1284899 |
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| End bp | 1285483 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639701804 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_845169 |
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| Protein GI | 116748482 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000181922 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000862933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCCCGCC GGGACAAGGA AAGAAGCCTT CACGCATTGT ACGATGCAAT CCGCCGGGAT
GCGTTCTACC GGAAAGAGAA CATGGGCGAT GTTTTCGTCC CGGGCGACGG GTCGATGGAG
GACGGCGTCA TCGTGTTGAT CGGGGAGGCC CCCGGACGCG ATGAGGAAAG AGAAGGCAAA
CCCTTCGTGG GAGCGGCCGG CCGGAACCTG AACGCGCTTT TGCTTGAAAA CGGGCTCGCG
CGCGAAGATC TCTTCATCAC CAACCTGTTG AAGTACCGCC CCCGCACTTC CACGGGAGCC
AACCGCAGCC CCGCGGCCGC GGAATGTCGA TATGCCCTTC CCTTTCTGGA AAGAGAGCTG
GACATTCTGC GGCCGGGACT CGCGGTGTGC CTGGGACTGT CACCGGCAAA AGCTCTCCTG
AACGACCCGC ACCTCAAGAT GGGACGGGCC AATGGCGCCT TGTTCCGCGG AGCCGGGCTG
AATATCCTTG TCACGTATCA TCCCTCGCCG TTCAATTTCA TGGTTCCGGA AAAGAGCAGC
GCACTTCGAA GGGCCTTCCG GCAAGTTGCC GTCCGGCCCG AATGA
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| Protein sequence | MARRDKERSL HALYDAIRRD AFYRKENMGD VFVPGDGSME DGVIVLIGEA PGRDEEREGK
PFVGAAGRNL NALLLENGLA REDLFITNLL KYRPRTSTGA NRSPAAAECR YALPFLEREL
DILRPGLAVC LGLSPAKALL NDPHLKMGRA NGALFRGAGL NILVTYHPSP FNFMVPEKSS
ALRRAFRQVA VRPE
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