| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0998 |
|---|
| Symbol | |
|---|
| ID | 4460917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1222230 |
|---|
| End bp | 1222757 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639701762 |
|---|
| Product | appr-1-p processing domain-containing protein |
|---|
| Protein accession | YP_845128 |
|---|
| Protein GI | 116748441 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA TCGTCAAGGG CAGGAAGATT TCTTTAGTGC AGGGGGATCT GACGGAGCTC
CGGGTTGACG CCATCGTAAA CGCCGCAAAC AGGCACCTCG CCTTGGGCGG AGGAGTCGCC
GGAGCCATCA GGATGAAAGG AGGACCCACC ATTCAGGAGG AATGCGACGC CATTGGCGGG
ACAGTGGTCG GCCAGGCGGT GATCACCGGC GGGGGCAACC TGAAGGCCGC TCACGTGATC
CACGCCGTGG GTCCCCGCTA TGGAGAAGGA GACGAGGACG AAAAGCTGCG CAATGCGACT
CTGAACAGTC TGAAAAGGGC CACTGAAAAA AGTCTCGCAT CCATTGCCTT TCCCGCCGTC
AGCACCGGCA TTTTCGGCTT TCCGAAGGAC CGGTGCGCAA AGATCATGCT CGACGCCGCC
GTTGCGTTCC TCGACAGGGA AACCACCTCG CTGCGGGATG TCATTTTCTG TCTCTGGTCG
AAGGAAGACC TGGAAATCTT CGAGAAGACC CTTCAATCCA TGGGCTGA
|
|---|
| Protein sequence | MEKIVKGRKI SLVQGDLTEL RVDAIVNAAN RHLALGGGVA GAIRMKGGPT IQEECDAIGG
TVVGQAVITG GGNLKAAHVI HAVGPRYGEG DEDEKLRNAT LNSLKRATEK SLASIAFPAV
STGIFGFPKD RCAKIMLDAA VAFLDRETTS LRDVIFCLWS KEDLEIFEKT LQSMG
|
|---|
| |