Gene Sfum_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0969 
Symbol 
ID4461189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1191449 
End bp1192636 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content52% 
IMG OID639701732 
Productglycosyl transferase, group 1 
Protein accessionYP_845100 
Protein GI116748413 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0289786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCT GCATGCTTGC ATATTCATAC TACGAGACCG ACAACAGGAT CAGAAGGTAC 
GCGGAAAGCC TTCGCGACAG AGGGGACACC GTCGATGTCA TTGCGTTGAA ACGCAAAGGC
GAGAGCGACT TCGACGTTGT CGGCGGTGTG AATGTCTACC GGATTCAGGA AAGGGTGTTG
AACGAGAAAA AAAGCATCAC ATACCTTTTC AGGGTGATGA AGTTCCTGGT CAGATCCACC
CTTGTTCTGA CCCGAAGACA CAAGGAGCTG CCCTACGATG CGGTCCACGT TCATTCACCG
CCGGATTTCG AGGTTTTCGC GGCCCTCTTC ATAAAATGCC TGGGCACCAG GGTCATCCTG
GATATCCATG ACATCGTGCC GGAGTTCTAT GCCGCCAAGT TCGGAGCAAC GAACGACTCG
CTTGTCTTCA GGTGCCTCGT ATGGGTGGAA AGGCTTTCCA TCCTGTTCTC GGACCATGTC
ATCATCTCGA ATCACTTGTG GTACGAGAGA CTCATATCCA GGTCCGTCAC ACCGGACAAA
TGCACGGTTT TGCTCAACTA CCCGGATAAT GCTCTTTTTT ACTCACGCGG CCAAAAGCTG
AACGGCGCCG GAGAGTTCAA GATCATTTAC CCGGGAACCC TGAACTGGCA CCAGGGTGTG
GATATTGCCG TGAAGGCCTT TTCCAGAGTT GCGGACCAAA TCCCCAACGC AAGATTCTAC
ATCTATGGAG ACGGTCCTCA ACGGCCTTTC CTGGCGAAGC TGATTTCCGA GTTGGGCCTC
GGCGACAAGG TGTTCCTGAA GGGACTGAAG TCTCTGGATG AAATCGCCCG GATAATGGCC
GATGCGGATC TCGGAGTGGT TCCCAAGAGG AACGACGCTT TCGGGGGAGA TGCTTTCAGT
ACGAAGACCT TCGAGTTCAT GGCTCTCGGG GTGCCCATCG TCCTGTCAAG GACCAGGATC
GACGCGTATT ACTTCAATGA CTCCGTAGTG AAATTTTTTG ACCCGGAAAA TACCGATGAT
CTGGCTTCTT CGTTTCTCGA GCTCGCAAAC AATGAAAAGA GAAGAAAGGG TTTGATCGAG
AACGCCTCCA ATTTCATCAC CGAATTCCGT TGGGACAGGA AAAGGACGGA TTACTGGGCG
ATTCTCGAGA GACTGGTTGG CAAGAATGTG AGTCATAATG CGCGTTGA
 
Protein sequence
MNVCMLAYSY YETDNRIRRY AESLRDRGDT VDVIALKRKG ESDFDVVGGV NVYRIQERVL 
NEKKSITYLF RVMKFLVRST LVLTRRHKEL PYDAVHVHSP PDFEVFAALF IKCLGTRVIL
DIHDIVPEFY AAKFGATNDS LVFRCLVWVE RLSILFSDHV IISNHLWYER LISRSVTPDK
CTVLLNYPDN ALFYSRGQKL NGAGEFKIIY PGTLNWHQGV DIAVKAFSRV ADQIPNARFY
IYGDGPQRPF LAKLISELGL GDKVFLKGLK SLDEIARIMA DADLGVVPKR NDAFGGDAFS
TKTFEFMALG VPIVLSRTRI DAYYFNDSVV KFFDPENTDD LASSFLELAN NEKRRKGLIE
NASNFITEFR WDRKRTDYWA ILERLVGKNV SHNAR