Gene Sfum_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0956 
Symbol 
ID4461176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1173876 
End bp1174664 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID639701719 
Productmethyltransferase type 11 
Protein accessionYP_845087 
Protein GI116748400 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACCG ATGCGATTCC CCTTGAAGAA GAGCGCCTGA GCGGCATTCA GAAACTGGAC 
GAGTATCCGG CGTTCCATGA AAGACACCGG ATTTTTCCCC AATGCTTCGA AAACCGGGGG
CACCGCAGAG TCCTCGATAT CGCTTCGGGT GTGGGGGTCG TCGGCAGGAA CATACGCGAC
GGATACCCTG CGGAACTGCT CTGCAACGAT ATCAGCGAAA CATGCCTGCA GATCATGAAA
GACACCGGTC TGCAGACGGT GTCTTTCGAC ATCGACGATC CGGAAAACCC CTTCCCCTTC
CCCGAGGGAA GCTTTGACGC GGTGATCGCG CTCGCCGTCA TCGAGCACAC CATAAACACC
GAGTACTTCA TCCGCGAGAT CGGCAGAATT TTGCAGCCGG GGGGTTATCT CTATATCTCG
GCACCGAACT ATTCCGGACT CACCTATCTT CTGCCGTTCC TATTGTCCGG AAAAACCTTC
CACGATCCTC TGTCCGAACG TGACCGCTAT GAATTCTACG CGCACGTGAG GTACTTCACC
TATAGAACGT TGCTGGAATA TGTGTCCTCG TTCCAGTTCG CCCCGGAGGC GGTCTATCTC
CCGATTCCGC AAGCAAGCTC GCGGTACGCG GCGCTCAAAT CGAGGTCGCC TCTGAAGGCG
CTGGCGTTTC GCCGCGGCAT GCAATTCATC TATAAATACT TTTCACCGCG GTGGGCTTCC
GAACCCGTCA TTTGCTTCAG AAAGGGCGCG GGATCGTTGC GGGGCAAGCC GCGCAAGGCA
ATCCTCTGA
 
Protein sequence
MRTDAIPLEE ERLSGIQKLD EYPAFHERHR IFPQCFENRG HRRVLDIASG VGVVGRNIRD 
GYPAELLCND ISETCLQIMK DTGLQTVSFD IDDPENPFPF PEGSFDAVIA LAVIEHTINT
EYFIREIGRI LQPGGYLYIS APNYSGLTYL LPFLLSGKTF HDPLSERDRY EFYAHVRYFT
YRTLLEYVSS FQFAPEAVYL PIPQASSRYA ALKSRSPLKA LAFRRGMQFI YKYFSPRWAS
EPVICFRKGA GSLRGKPRKA IL