Gene Sfum_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0940 
Symbol 
ID4460250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1154284 
End bp1154745 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content56% 
IMG OID639701703 
Productphosphohistidine phosphatase, SixA 
Protein accessionYP_845071 
Protein GI116748384 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID[TIGR00249] phosphohistidine phosphatase SixA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCT ACCTTGTTCA ACACGGCCGG AGCCTCCCGA GGGAAATCGA CGCGGAACAG 
GGATTGTCAT CCGAGGGAAT CGCCCAGGTC GAGCGTATCG CCGGGGTTGC CCGGGGTTAT
CGGGTCAGGG TTTCAAAGAT TCTGCACAGC GGGAAAAAAA GGGCTCGTCA GACCGCTGAC
ATCTACGGCA GATTGTTGGA ACCGGCCGGT GGGATCGAAG AGTGCGCGGG GTTGAATCCG
ATGGATGACG TGTCTTCGTT CGCGGGACGT GTCCGAAGCG ATGAAAATCT CATGATTGTA
GGACACCTGC CTTTTATGGA AAAATTGACC TCACATTTGG TTGCCGGGTC GGCGGAAAGG
CGCGTGTTCA AGTTCCAGAA CGGGGGCATC GTTTGCATGG ACAAGGAGGC CGGCGACCGT
TACTGGTTCA TCAAATGGAC ATTGATGCCC GAAATCGGAT AA
 
Protein sequence
MALYLVQHGR SLPREIDAEQ GLSSEGIAQV ERIAGVARGY RVRVSKILHS GKKRARQTAD 
IYGRLLEPAG GIEECAGLNP MDDVSSFAGR VRSDENLMIV GHLPFMEKLT SHLVAGSAER
RVFKFQNGGI VCMDKEAGDR YWFIKWTLMP EIG